RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 A0A096LNI7 61 aa5.96□□□□□ -1.46
MCF2L-223ENST00000473345 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.96□□□□□ -1.46
MCF2L-223ENST00000473345 LOC105371267A0A1B0GV96 52 aa5.96□□□□□ -1.46
MCF2L-223ENST00000473345 SERF1AO75920 110 aa5.96□□□□□ -1.46
MCF2L-223ENST00000473345 LINC00614P0C842 121 aa5.96□□□□□ -1.46
MCF2L-223ENST00000473345 CHCHD1Q96BP2 118 aaKnown RBP5.96□□□□□ -1.46
MCF2L-223ENST00000473345 PACRGQ96M98 296 aaPredicted RBP5.96□□□□□ -1.46
MCF2L-223ENST00000473345 NIT2Q9NQR4 276 aa5.96□□□□□ -1.46
MCF2L-223ENST00000473345 IGHV1-24A0A0C4DH33 117 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 IGKV2-24A0A0C4DH68 120 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 TRBV27A0A0K0K1C4 114 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 A0A1B0GUV1 79 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 IFITM10A6NMD0 228 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 F5H697 171 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
MCF2L-223ENST00000473345 SUMO2P61956 95 aaKnown RBP5.95□□□□□ -1.46
MCF2L-223ENST00000473345 MAJINQ3KP22 176 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 HIGD2BQ4VC39 106 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 Q8N8P6 123 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 RPL39LQ96EH5 51 aaKnown RBP5.95□□□□□ -1.46
MCF2L-223ENST00000473345 DPH3Q96FX2 82 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 MAP1LC3AQ9H492 121 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 NXT2Q9NPJ8 142 aaKnown RBP5.95□□□□□ -1.46
MCF2L-223ENST00000473345 PKIGQ9Y2B9 76 aa5.95□□□□□ -1.46
MCF2L-223ENST00000473345 K7EMI3 77 aa5.94□□□□□ -1.46
MCF2L-223ENST00000473345 STPG4Q8N801 248 aa5.94□□□□□ -1.46
MCF2L-223ENST00000473345 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
MCF2L-223ENST00000473345 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
MCF2L-223ENST00000473345 A0A096LNJ9 63 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 GAGE12HA6NDE8 117 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 SDHAF1A6NFY7 115 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 PMCHP20382 165 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 CFAP161Q6P656 301 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 LINC00526Q96FQ7 95 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 ST20Q9HBF5 79 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
MCF2L-223ENST00000473345 LOC389332A0A1B0GUA5 103 aa5.92□□□□□ -1.46
MCF2L-223ENST00000473345 VCYO14598 125 aa5.92□□□□□ -1.46
MCF2L-223ENST00000473345 SMCPP49901 116 aaPredicted RBP5.92□□□□□ -1.46
MCF2L-223ENST00000473345 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
MCF2L-223ENST00000473345 HIST1H2BLQ99880 126 aa5.92□□□□□ -1.46
MCF2L-223ENST00000473345 TMEM243Q9BU79 118 aa5.92□□□□□ -1.46
MCF2L-223ENST00000473345 HSBP1O75506 76 aa5.91□□□□□ -1.46
MCF2L-223ENST00000473345 RNASEKQ6P5S7 137 aaKnown RBP5.91□□□□□ -1.46
MCF2L-223ENST00000473345 SPINK6Q6UWN8 80 aa5.91□□□□□ -1.46
MCF2L-223ENST00000473345 FA2HQ7L5A8 372 aa5.91□□□□□ -1.46
MCF2L-223ENST00000473345 TMEM18Q96B42 140 aa5.91□□□□□ -1.46
MCF2L-223ENST00000473345 IGKV3OR2-268A0A0C4DH90 116 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 H7C423 109 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 TCAPO15273 167 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 FCER1GP30273 86 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 FAM19A2Q8N3H0 131 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.46
MCF2L-223ENST00000473345 MUC2Q02817 5179 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
MCF2L-223ENST00000473345 I3L3M4 83 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 UBE2L6O14933 153 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 TSHBP01222 138 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 FABP4P15090 132 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 S100A2P29034 98 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 AMTP48728 403 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 FOXI1Q12951 378 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 COTL1Q14019 142 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 ORMDL2Q53FV1 153 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 KIR2DL4Q99706 377 aa5.89□□□□□ -1.47
MCF2L-223ENST00000473345 A0A1W2PNN7 141 aa5.88□□□□□ -1.47
MCF2L-223ENST00000473345 LINC01549A6NIU2 74 aa5.88□□□□□ -1.47
MCF2L-223ENST00000473345 HBDP02042 147 aa5.88□□□□□ -1.47
MCF2L-223ENST00000473345 PMCHL1Q16048 86 aa5.88□□□□□ -1.47
MCF2L-223ENST00000473345 CHCHD10Q8WYQ3 142 aaPredicted RBP5.88□□□□□ -1.47
MCF2L-223ENST00000473345 TOMM6Q96B49 74 aa5.88□□□□□ -1.47
MCF2L-223ENST00000473345 ZNF25P17030 456 aaPredicted RBP5.87□□□□□ -1.47
MCF2L-223ENST00000473345 G0S2P27469 103 aa5.87□□□□□ -1.47
MCF2L-223ENST00000473345 KRTAP11-1Q8IUC1 163 aa5.87□□□□□ -1.47
MCF2L-223ENST00000473345 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
MCF2L-223ENST00000473345 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.86□□□□□ -1.47
MCF2L-223ENST00000473345 IGKV2-29A2NJV5 120 aaPredicted RBP5.86□□□□□ -1.47
MCF2L-223ENST00000473345 LEPROTL1O95214 131 aa5.86□□□□□ -1.47
MCF2L-223ENST00000473345 REG3GQ6UW15 175 aa5.86□□□□□ -1.47
MCF2L-223ENST00000473345 C2orf66Q6UXQ4 117 aa5.86□□□□□ -1.47
MCF2L-223ENST00000473345 LINC00173Q6ZV60 143 aa5.86□□□□□ -1.47
MCF2L-223ENST00000473345 IGIPA6NJ69 53 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 C3orf79P0CE67 100 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 Q6ZRP5 223 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 ERASQ7Z444 233 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 PRR26Q8N8Z3 221 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 CYSLTR1Q9Y271 337 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 PYGO1Q9Y3Y4 419 aa5.85□□□□□ -1.47
MCF2L-223ENST00000473345 NPSP0C0P6 89 aa5.84□□□□□ -1.47
MCF2L-223ENST00000473345 JOSD1Q15040 202 aaPredicted RBP5.84□□□□□ -1.47
MCF2L-223ENST00000473345 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.47
MCF2L-223ENST00000473345 AMMECR1LQ6DCA0 310 aa5.84□□□□□ -1.47
MCF2L-223ENST00000473345 FAM104AQ969W3 186 aa5.84□□□□□ -1.47
MCF2L-223ENST00000473345 TIMM17AQ99595 171 aa5.84□□□□□ -1.47
MCF2L-223ENST00000473345 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
MCF2L-223ENST00000473345 PSORS1C2Q9UIG4 136 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms