RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 INAFM2P0DMQ5 153 aa11.2□□□□□ -0.62
PKD1-208ENST00000472577 GCSHP23434 173 aa11.2□□□□□ -0.62
PKD1-208ENST00000472577 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
PKD1-208ENST00000472577 PMCHL1Q16048 86 aa11.2□□□□□ -0.62
PKD1-208ENST00000472577 VCX2Q9H322 139 aa11.2□□□□□ -0.62
PKD1-208ENST00000472577 FAT1Q14517 4588 aa11.19□□□□□ -0.62
PKD1-208ENST00000472577 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
PKD1-208ENST00000472577 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 UBE2D1P51668 147 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 LINC00242Q5T6M2 205 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 Q5VSD8 79 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 C5orf38Q86SI9 138 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
PKD1-208ENST00000472577 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
PKD1-208ENST00000472577 COX7A2LO14548 114 aa11.17□□□□□ -0.62
PKD1-208ENST00000472577 HBDP02042 147 aa11.17□□□□□ -0.62
PKD1-208ENST00000472577 LINC01620Q4KN68 170 aa11.17□□□□□ -0.62
PKD1-208ENST00000472577 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
PKD1-208ENST00000472577 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
PKD1-208ENST00000472577 GVQW2A0A096LPI5 108 aaPredicted RBP11.16□□□□□ -0.62
PKD1-208ENST00000472577 IGHV1-58A0A0C4DH39 117 aa11.16□□□□□ -0.62
PKD1-208ENST00000472577 SLPIP03973 132 aa11.16□□□□□ -0.62
PKD1-208ENST00000472577 COX6A2Q02221 97 aa11.16□□□□□ -0.62
PKD1-208ENST00000472577 BAGE3Q86Y29 109 aa11.16□□□□□ -0.62
PKD1-208ENST00000472577 VPS13BQ7Z7G8 4022 aa11.15□□□□□ -0.62
PKD1-208ENST00000472577 LINC00310P59036 64 aa11.15□□□□□ -0.62
PKD1-208ENST00000472577 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
PKD1-208ENST00000472577 MALP21145 153 aa11.14□□□□□ -0.63
PKD1-208ENST00000472577 CNBPP62633 177 aaKnown RBP11.14□□□□□ -0.63
PKD1-208ENST00000472577 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
PKD1-208ENST00000472577 FLG2Q5D862 2391 aaPredicted RBP11.14□□□□□ -0.63
PKD1-208ENST00000472577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.13□□□□□ -0.63
PKD1-208ENST00000472577 HAMPP81172 84 aa11.13□□□□□ -0.63
PKD1-208ENST00000472577 LINC00526Q96FQ7 95 aa11.13□□□□□ -0.63
PKD1-208ENST00000472577 SERF1AO75920 110 aa11.12□□□□□ -0.63
PKD1-208ENST00000472577 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
PKD1-208ENST00000472577 CST9LQ9H4G1 147 aa11.12□□□□□ -0.63
PKD1-208ENST00000472577 SRRM2Q9UQ35 2752 aaKnown RBP11.12□□□□□ -0.63
PKD1-208ENST00000472577 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
PKD1-208ENST00000472577 HSBP1O75506 76 aa11.11□□□□□ -0.63
PKD1-208ENST00000472577 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
PKD1-208ENST00000472577 PMVKQ15126 192 aa11.11□□□□□ -0.63
PKD1-208ENST00000472577 FAM19A2Q8N3H0 131 aa11.11□□□□□ -0.63
PKD1-208ENST00000472577 DNAH8Q96JB1 4490 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 A0A087WZ39 114 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 NUPR1O60356 82 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 APOMO95445 188 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 FAM30AQ9NZY2 134 aa11.1□□□□□ -0.63
PKD1-208ENST00000472577 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
PKD1-208ENST00000472577 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
PKD1-208ENST00000472577 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
PKD1-208ENST00000472577 ATP5LO75964 103 aa11.09□□□□□ -0.63
PKD1-208ENST00000472577 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
PKD1-208ENST00000472577 HERVK_113P63121 156 aa11.08□□□□□ -0.64
PKD1-208ENST00000472577 SEC11AP67812 179 aa11.08□□□□□ -0.64
PKD1-208ENST00000472577 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
PKD1-208ENST00000472577 TINCRA0A1B0GVN0 87 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 NDUFA6P56556 154 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 Q6ZSA8 131 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 OR10D4PQ8NGN7 298 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 GEMIN7Q9H840 131 aaKnown RBP11.07□□□□□ -0.64
PKD1-208ENST00000472577 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
PKD1-208ENST00000472577 LINC01561Q8N1V8 128 aa11.06□□□□□ -0.64
PKD1-208ENST00000472577 SYCNQ0VAF6 134 aa11.05□□□□□ -0.64
PKD1-208ENST00000472577 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
PKD1-208ENST00000472577 IFI27L1Q96BM0 104 aa11.05□□□□□ -0.64
PKD1-208ENST00000472577 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 KIAA0087Q14695 138 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 Q6ZRU5 148 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 LINC00469Q8N7U9 141 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 CARD19Q96LW7 228 aa11.04□□□□□ -0.64
PKD1-208ENST00000472577 IGLC3P0DOY3 106 aa11.03□□□□□ -0.64
PKD1-208ENST00000472577 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
PKD1-208ENST00000472577 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
PKD1-208ENST00000472577 PANO1I0J062 215 aa11.01□□□□□ -0.65
PKD1-208ENST00000472577 LEPROTL1O95214 131 aa11.01□□□□□ -0.65
PKD1-208ENST00000472577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.01□□□□□ -0.65
PKD1-208ENST00000472577 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
PKD1-208ENST00000472577 SMIM1B2RUZ4 78 aa11□□□□□ -0.65
PKD1-208ENST00000472577 COA6Q5JTJ3 125 aaKnown RBP11□□□□□ -0.65
PKD1-208ENST00000472577 PACRGQ96M98 296 aaPredicted RBP11□□□□□ -0.65
PKD1-208ENST00000472577 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
PKD1-208ENST00000472577 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
PKD1-208ENST00000472577 FABP4P15090 132 aa10.99□□□□□ -0.65
PKD1-208ENST00000472577 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms