RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 ALKBH7Q9BT30 221 aaPredicted RBP4.44□□□□□ -1.7
SCN9A-206ENST00000472119 A0A087WTM6 91 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 FUSP35637 526 aaKnown RBP eCLIP4.43□□□□□ -1.7
SCN9A-206ENST00000472119 MIAQ16674 131 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 DGAT2L7PQ6IED9 249 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 OR5A1Q8NGJ0 315 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 RMI2Q96E14 147 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 TMEM101Q96IK0 257 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 OPRPNQ99935 248 aaPredicted RBP4.43□□□□□ -1.7
SCN9A-206ENST00000472119 PRR34Q9NV39 138 aa4.43□□□□□ -1.7
SCN9A-206ENST00000472119 LECT2O14960 151 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 CFC1P0CG37 223 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 ZNF25P17030 456 aaPredicted RBP4.42□□□□□ -1.7
SCN9A-206ENST00000472119 WFDC2Q14508 124 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 RNASE13Q5GAN3 156 aaKnown RBP4.42□□□□□ -1.7
SCN9A-206ENST00000472119 MRPL52Q86TS9 123 aaKnown RBP4.42□□□□□ -1.7
SCN9A-206ENST00000472119 ZNF664Q8N3J9 261 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 BAALCQ8WXS3 180 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 TMEM18Q96B42 140 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 NXT2Q9NPJ8 142 aaKnown RBP4.42□□□□□ -1.7
SCN9A-206ENST00000472119 CDC42SE2Q9NRR3 84 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 UBE2D4Q9Y2X8 147 aa4.42□□□□□ -1.7
SCN9A-206ENST00000472119 PKD1P98161 4303 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 TRAV8-4A0A0B4J246 113 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 LRCOL1A6NCL2 159 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 COLCA2A8K830 154 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 TRGC2P03986 189 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 SMAGPQ0VAQ4 97 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 ORMDL2Q53FV1 153 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 SPATA12Q7Z6I5 190 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 C18orf32Q8TCD1 76 aa4.41□□□□□ -1.7
SCN9A-206ENST00000472119 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.7
SCN9A-206ENST00000472119 LINC00959A0A1B0GUT2 108 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 KRTAP26-1Q6PEX3 210 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 C2orf66Q6UXQ4 117 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 Q6ZUT4 128 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 FA2HQ7L5A8 372 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 SMIM29Q86T20 159 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 CHCHD10Q8WYQ3 142 aaPredicted RBP4.4□□□□□ -1.71
SCN9A-206ENST00000472119 FAM104AQ969W3 186 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 TIMM21Q9BVV7 248 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
SCN9A-206ENST00000472119 TMA7Q9Y2S6 64 aaKnown RBP4.4□□□□□ -1.71
SCN9A-206ENST00000472119 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.71
SCN9A-206ENST00000472119 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 TRAV13-1A0A0B4J241 112 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 K7EMI3 77 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 ATP6V1G1O75348 118 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 LINC00614P0C842 121 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 XCL1P47992 114 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 SS18Q15532 418 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 PKHD1P08F94 4074 aa4.39□□□□□ -1.71
SCN9A-206ENST00000472119 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
SCN9A-206ENST00000472119 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 LINC01546A6NGU7 62 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 IGIPA6NJ69 53 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 CCL25O15444 150 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 MRPS36P82909 103 aaKnown RBP4.38□□□□□ -1.71
SCN9A-206ENST00000472119 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 Q8N814 137 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 TOMM6Q96B49 74 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 SCGB3A1Q96QR1 104 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 PYGO1Q9Y3Y4 419 aa4.38□□□□□ -1.71
SCN9A-206ENST00000472119 C1orf196B1AJZ1 125 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 PRSS1P07477 247 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 S100A1P23297 94 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 G0S2P27469 103 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 RAB5BP61020 215 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 CD164L2Q6UWJ8 174 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 TMEM141Q96I45 108 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 VCX2Q9H322 139 aa4.37□□□□□ -1.71
SCN9A-206ENST00000472119 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
SCN9A-206ENST00000472119 IGLV5-52A0A0A0MRZ9 124 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 Q6ZN92 141 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 TEX43Q6ZNM6 134 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 LINC00173Q6ZV60 143 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 ERASQ7Z444 233 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 C5orf38Q86SI9 138 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 BAGE3Q86Y29 109 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
SCN9A-206ENST00000472119 A0A096LNJ9 63 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 HBDP02042 147 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 UBE2D1P51668 147 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 COX6A2Q02221 97 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 LINC01620Q4KN68 170 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 LINC00242Q5T6M2 205 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 FAM19A2Q8N3H0 131 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 C15orf56Q8N910 161 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
SCN9A-206ENST00000472119 AMELXQ99217 191 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms