RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 PMCHP20382 165 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 COTL1Q14019 142 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 RNASE13Q5GAN3 156 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 Q8N377 158 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 TSKUQ8WUA8 353 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 TMEM70Q9BUB7 260 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 OSTCQ9NRP0 149 aa4.27□□□□□ -1.73
PTP4A1-202ENST00000470661 FGF6P10767 208 aa4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 MIAQ16674 131 aa4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 MRPL54Q6P161 138 aaKnown RBP4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 Q6ZSA8 131 aa4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 ST20Q9HBF5 79 aa4.26□□□□□ -1.73
PTP4A1-202ENST00000470661 APCSP02743 223 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 XCL1P47992 114 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 HNRNPA3P51991 378 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 PEA15Q15121 130 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 MRPL51Q4U2R6 128 aaKnown RBP4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 AMMECR1LQ6DCA0 310 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 SDIM1Q6ZPB5 146 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 CHCHD10Q8WYQ3 142 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 CHAC1Q9BUX1 264 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 TMEM191AQ9H0A3 160 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 NAT8Q9UHE5 227 aa4.25□□□□□ -1.73
PTP4A1-202ENST00000470661 I3L3M4 83 aa4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 POLR2KP53803 58 aaKnown RBP4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 RIGQ13278 110 aa4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 C15orf56Q8N910 161 aa4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 BORCS7Q96B45 105 aa4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
PTP4A1-202ENST00000470661 TRBV6-5A0A0K0K1A5 114 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 SMIM27A0A1W2PRY6 76 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 ESDP10768 282 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 RPL39P62891 51 aaKnown RBP4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 FAM74A3Q4VXF1 159 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 FAM104BQ5XKR9 115 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 C9orf163Q8N9P6 203 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
PTP4A1-202ENST00000470661 IGKV2-24A0A0C4DH68 120 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 LINC00959A0A1B0GUT2 108 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 D6R8Y8 96 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 TCAPO15273 167 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 CCL25O15444 150 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 NPYP01303 97 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 PKIAP61925 76 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 IFITM2Q01629 132 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 COX6A2Q02221 97 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 OR5A1Q8NGJ0 315 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 FAM104AQ969W3 186 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 CDC42SE2Q9NRR3 84 aa4.22□□□□□ -1.73
PTP4A1-202ENST00000470661 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 TRAV8-4A0A0B4J246 113 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 TRBV27A0A0K0K1C4 114 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 FCER1GP30273 86 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 CKS2P33552 79 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.747e-7■■■□□ 14.8
PTP4A1-202ENST00000470661 Q6ZUT4 128 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 C5orf38Q86SI9 138 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 ZNF664Q8N3J9 261 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 MRAP2Q96G30 205 aa4.21□□□□□ -1.74
PTP4A1-202ENST00000470661 A0A0J9YXV3 536 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 A0A1B0GXF2 115 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 C7orf77A4D0Y5 90 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 MAJINQ3KP22 176 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 LBHQ53QV2 105 aaPredicted RBP4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 TMEM101Q96IK0 257 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 BTF3L4Q96K17 158 aa4.2□□□□□ -1.74
PTP4A1-202ENST00000470661 IGHV3-64A0A075B6Q5 118 aa4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 NDUFS6O75380 124 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 ADCYAP1P18509 176 aa4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 CNBPP62633 177 aaKnown RBP4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 UBE2D4Q9Y2X8 147 aa4.19□□□□□ -1.74
PTP4A1-202ENST00000470661 IGLV4-69A0A075B6H9 119 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 A0A087WZ39 114 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 A0A096LNI7 61 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 RAB14P61106 215 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 HBBP68871 147 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 SS18Q15532 418 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 TMEM136Q6ZRR5 245 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 MRPL52Q86TS9 123 aaKnown RBP4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 PRELID3AQ96N28 172 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 TNXBP22105 4242 aa4.18□□□□□ -1.74
PTP4A1-202ENST00000470661 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 TRBV24-1A0A075B6N3 115 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 GVQW2A0A096LPI5 108 aaPredicted RBP4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 PHOX2AO14813 284 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 ZNF25P17030 456 aaPredicted RBP4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 Q6ZRU5 148 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 SPACA4Q8TDM5 124 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 KIR2DL4Q99706 377 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 SMIM2Q9BVW6 85 aa4.17□□□□□ -1.74
PTP4A1-202ENST00000470661 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms