RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	RBM38	Q9H0Z9	239 aa	Known RBP	4.65	□□□□□ -1.67
LSM2-210	ENST00000470086	HSPB11	Q9Y547	144 aa		4.65	□□□□□ -1.67
LSM2-210	ENST00000470086	PLA2G10	O15496	165 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	FGF6	P10767	208 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	RAB5A	P20339	215 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	ZNF726P1	Q15940	193 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	KRTAP13-3	Q3SY46	172 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	LINC00173	Q6ZV60	143 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	TYMSOS	Q8TAI1	123 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	SMIM12	Q96EX1	92 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	MRAP2	Q96G30	205 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	PPDPF	Q9H3Y8	114 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	BIN3	Q9NQY0	253 aa		4.64	□□□□□ -1.67
LSM2-210	ENST00000470086	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	LINC00959	A0A1B0GUT2	108 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	NAP1L6	A6NFF2	107 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086		F8W036	122 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	UBE2L6	O14933	153 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	BCL2L11	O43521	198 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	OR5AL1	P0C617	328 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	RPL32	P62910	135 aa	Known RBP	4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	C10orf25	Q5T742	122 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	OR5A1	Q8NGJ0	315 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	STOML3	Q8TAV4	291 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	SPANXA1	Q9NS26	97 aa		4.63	□□□□□ -1.67
LSM2-210	ENST00000470086	SMKR1	H3BMG3	65 aa		4.62	□□□□□ -1.67
LSM2-210	ENST00000470086	LTA	P01374	205 aa		4.62	□□□□□ -1.67
LSM2-210	ENST00000470086	IFNA1	P01562	189 aa		4.62	□□□□□ -1.67
LSM2-210	ENST00000470086	AP1S3	Q96PC3	154 aa		4.62	□□□□□ -1.67
LSM2-210	ENST00000470086	SIGMAR1	Q99720	223 aa		4.62	□□□□□ -1.67
LSM2-210	ENST00000470086	IL7	P13232	177 aa		4.61	□□□□□ -1.67
LSM2-210	ENST00000470086	S100P	P25815	95 aa		4.61	□□□□□ -1.67
LSM2-210	ENST00000470086	SPANXN1	Q5VSR9	72 aa		4.61	□□□□□ -1.67
LSM2-210	ENST00000470086	CAMK2N2	Q96S95	79 aa		4.61	□□□□□ -1.67
LSM2-210	ENST00000470086	PKIG	Q9Y2B9	76 aa		4.61	□□□□□ -1.67
LSM2-210	ENST00000470086	LINC00587	B1AMM8	73 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	ZNF861P	O60384	105 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	PFDN1	O60925	122 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	GIP	P09681	153 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	NTF3	P20783	257 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	H2BFS	P57053	126 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	C4orf26	Q17RF5	130 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	RASL11A	Q6T310	242 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	COMMD7	Q86VX2	200 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	LINC00304	Q8N9R0	145 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	RPL39L	Q96EH5	51 aa	Known RBP	4.6	□□□□□ -1.67
LSM2-210	ENST00000470086	MED28	Q9H204	178 aa		4.6	□□□□□ -1.67
LSM2-210	ENST00000470086		A0A1W2PRE2	83 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	CXCL1	P09341	107 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	CFC1B	P0CG36	223 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	UBE2B	P63146	152 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	SS18	Q15532	418 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	RNASE13	Q5GAN3	156 aa	Known RBP	4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	C9orf129	Q5T035	196 aa	Known RBP	4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	TSKU	Q8WUA8	353 aa		4.59	□□□□□ -1.67
LSM2-210	ENST00000470086	MACF1	Q9UPN3	7388 aa	Known RBP	4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	SYNE2	Q8WXH0	6885 aa	Known RBP	4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	FAM240A	A0A1B0GVK7	77 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	TSHB	P01222	138 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	IGLC6	P0CF74	106 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	LINC00242	Q5T6M2	205 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	AMMECR1L	Q6DCA0	310 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	FAM231D	Q6ZW35	169 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	GATD1	Q8NB37	220 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	OR13C6P	Q8NH95	151 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	PPP1R1C	Q8WVI7	109 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	NIT2	Q9NQR4	276 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	C6orf48	Q9UBA6	75 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	PRO0628	Q9UI54	55 aa		4.58	□□□□□ -1.68
LSM2-210	ENST00000470086	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	LYRM1	O43325	122 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	CXorf1	O96002	111 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	ATP6V0C	P27449	155 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	SPAG11B	Q08648	103 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	C1orf195	Q5TG92	126 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	EIF5AL1	Q6IS14	154 aa	Known RBP	4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	CBLN2	Q8IUK8	224 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	SMIM20	Q8N5G0	67 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	SCGB1C1	Q8TD33	95 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	FMC1	Q96HJ9	113 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	TMEM167B	Q9NRX6	74 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086	ZFP30	Q9Y2G7	519 aa		4.57	□□□□□ -1.68
LSM2-210	ENST00000470086		A0A1B0GV90	55 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086		A6NDN8	102 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	PDE6D	O43924	150 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	SMIM17	P0DL12	118 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	UBE2G1	P62253	170 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	C5orf38	Q86SI9	138 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	C2orf48	Q96LS8	159 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	C2orf88	Q9BSF0	95 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	SMDT1	Q9H4I9	107 aa		4.56	□□□□□ -1.68
LSM2-210	ENST00000470086	C19orf71	A6NCJ1	209 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	CCDC160	A6NGH7	325 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	INMT-MINDY4	F8WBC2	141 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	MPC2	O95563	127 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	APCS	P02743	223 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	SMAGP	Q0VAQ4	97 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086		Q6ZN92	141 aa		4.55	□□□□□ -1.68
LSM2-210	ENST00000470086	C3orf22	Q8N5N4	141 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms