RNA–Protein interactions for RNA: ENST00000469356.3

SREBF1-208, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-208ENST00000469356 FAM19A3Q7Z5A8 133 aa15.17■□□□□ 0.02
SREBF1-208ENST00000469356 GEMIN7Q9H840 131 aaKnown RBP15.17■□□□□ 0.02
SREBF1-208ENST00000469356 LECT2O14960 151 aa15.16■□□□□ 0.02
SREBF1-208ENST00000469356 NUPR1O60356 82 aa15.16■□□□□ 0.02
SREBF1-208ENST00000469356 LINC00242Q5T6M2 205 aa15.16■□□□□ 0.02
SREBF1-208ENST00000469356 Q8N814 137 aa15.16■□□□□ 0.02
SREBF1-208ENST00000469356 PACRGQ96M98 296 aaPredicted RBP15.16■□□□□ 0.02
SREBF1-208ENST00000469356 IGHV1-58A0A0C4DH39 117 aa15.15■□□□□ 0.02
SREBF1-208ENST00000469356 S100A6P06703 90 aa15.14■□□□□ 0.01
SREBF1-208ENST00000469356 NTN5Q8WTR8 489 aaPredicted RBP15.14■□□□□ 0.01
SREBF1-208ENST00000469356 PGPEP1Q9NXJ5 209 aa15.14■□□□□ 0.01
SREBF1-208ENST00000469356 IGHV3OR16-9A0A0B4J2B5 98 aa15.13■□□□□ 0.01
SREBF1-208ENST00000469356 C5orf38Q86SI9 138 aa15.13■□□□□ 0.01
SREBF1-208ENST00000469356 TRAV12-1A0A0B4J245 112 aa15.12■□□□□ 0.01
SREBF1-208ENST00000469356 TINCRA0A1B0GVN0 87 aa15.12■□□□□ 0.01
SREBF1-208ENST00000469356 FABP4P15090 132 aa15.12■□□□□ 0.01
SREBF1-208ENST00000469356 CDPF1Q6NVV7 123 aa15.11■□□□□ 0.01
SREBF1-208ENST00000469356 LINC01561Q8N1V8 128 aa15.11■□□□□ 0.01
SREBF1-208ENST00000469356 A0A0J9YXV3 536 aa15.1■□□□□ 0.01
SREBF1-208ENST00000469356 A0A1B0GVY2 172 aa15.1■□□□□ 0.01
SREBF1-208ENST00000469356 WFDC2Q14508 124 aa15.1■□□□□ 0.01
SREBF1-208ENST00000469356 SPATA12Q7Z6I5 190 aa15.1■□□□□ 0.01
SREBF1-208ENST00000469356 MAP1LC3CQ9BXW4 147 aa15.1■□□□□ 0.01
SREBF1-208ENST00000469356 A0A087WZ39 114 aa15.09■□□□□ 0.01
SREBF1-208ENST00000469356 hDV102S1A0JD36 115 aa15.09■□□□□ 0.01
SREBF1-208ENST00000469356 CHTOPQ9Y3Y2 248 aaKnown RBP15.09■□□□□ 0.01
SREBF1-208ENST00000469356 ZNF561-AS1K7EIQ3 104 aa15.08■□□□□ 0
SREBF1-208ENST00000469356 COX6A2Q02221 97 aa15.08■□□□□ 0
SREBF1-208ENST00000469356 LINC00469Q8N7U9 141 aa15.07■□□□□ 0
SREBF1-208ENST00000469356 C15orf56Q8N910 161 aa15.07■□□□□ 0
SREBF1-208ENST00000469356 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.06■□□□□ 0
SREBF1-208ENST00000469356 H3BRM9 83 aa15.06■□□□□ 0
SREBF1-208ENST00000469356 IGLC3P0DOY3 106 aa15.06■□□□□ 0
SREBF1-208ENST00000469356 OR10D4PQ8NGN7 298 aa15.06■□□□□ 0
SREBF1-208ENST00000469356 FAT2Q9NYQ8 4349 aa15.06■□□□□ 0
SREBF1-208ENST00000469356 GVQW2A0A096LPI5 108 aaPredicted RBP15.05■□□□□ -0
SREBF1-208ENST00000469356 IGLV5-52A0A0A0MRZ9 124 aa15.05■□□□□ -0
SREBF1-208ENST00000469356 CHAC1Q9BUX1 264 aa15.05■□□□□ -0
SREBF1-208ENST00000469356 IGHV3-64A0A075B6Q5 118 aa15.04■□□□□ -0
SREBF1-208ENST00000469356 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.04■□□□□ -0
SREBF1-208ENST00000469356 F8VRH5 84 aa15.04■□□□□ -0
SREBF1-208ENST00000469356 H0Y8G0 127 aa15.04■□□□□ -0
SREBF1-208ENST00000469356 S100A2P29034 98 aa15.04■□□□□ -0
SREBF1-208ENST00000469356 HIGD2BQ4VC39 106 aa15.03■□□□□ -0
SREBF1-208ENST00000469356 ORAOV1Q8WV07 137 aa15.03■□□□□ -0
SREBF1-208ENST00000469356 CDKN2A-AS1Q9UH64 79 aa15.03■□□□□ -0
SREBF1-208ENST00000469356 IGLV5-45A0A087WSX0 123 aa15.02■□□□□ -0
SREBF1-208ENST00000469356 F8WDY8 70 aa15.01□□□□□ -0.01
SREBF1-208ENST00000469356 KRTAP10-2P60368 255 aa15.01□□□□□ -0.01
SREBF1-208ENST00000469356 SPAG11BQ08648 103 aa15□□□□□ -0.01
SREBF1-208ENST00000469356 IGLV4-69A0A075B6H9 119 aa14.99□□□□□ -0.01
SREBF1-208ENST00000469356 C16orf90A8MZG2 172 aa14.99□□□□□ -0.01
SREBF1-208ENST00000469356 PRSS2P07478 247 aa14.99□□□□□ -0.01
SREBF1-208ENST00000469356 CNBPP62633 177 aaKnown RBP14.99□□□□□ -0.01
SREBF1-208ENST00000469356 C2orf48Q96LS8 159 aa14.99□□□□□ -0.01
SREBF1-208ENST00000469356 MRPL35Q9NZE8 188 aaKnown RBP14.99□□□□□ -0.01
SREBF1-208ENST00000469356 ODF1Q14990 250 aa14.98□□□□□ -0.01
SREBF1-208ENST00000469356 TMEM170BQ5T4T1 132 aa14.98□□□□□ -0.01
SREBF1-208ENST00000469356 PLNP26678 52 aa14.97□□□□□ -0.01
SREBF1-208ENST00000469356 PET117Q6UWS5 81 aa14.97□□□□□ -0.01
SREBF1-208ENST00000469356 C11orf86A6NJI1 115 aa14.96□□□□□ -0.01
SREBF1-208ENST00000469356 SYS1-DBNDD2H3BUS1 97 aa14.96□□□□□ -0.01
SREBF1-208ENST00000469356 ZNF22P17026 224 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-208ENST00000469356 GCSHP23434 173 aa14.96□□□□□ -0.01
SREBF1-208ENST00000469356 HIST3H2BBQ8N257 126 aa14.96□□□□□ -0.01
SREBF1-208ENST00000469356 PKIGQ9Y2B9 76 aa14.96□□□□□ -0.01
SREBF1-208ENST00000469356 SNRPEP62304 92 aaKnown RBP14.95□□□□□ -0.02
SREBF1-208ENST00000469356 CAMK2N2Q96S95 79 aa14.95□□□□□ -0.02
SREBF1-208ENST00000469356 TOMM7Q9P0U1 55 aa14.95□□□□□ -0.02
SREBF1-208ENST00000469356 DPM2O94777 84 aa14.94□□□□□ -0.02
SREBF1-208ENST00000469356 SYCNQ0VAF6 134 aa14.94□□□□□ -0.02
SREBF1-208ENST00000469356 C6orf226Q5I0X4 101 aa14.94□□□□□ -0.02
SREBF1-208ENST00000469356 Q8IZM0 81 aa14.94□□□□□ -0.02
SREBF1-208ENST00000469356 NDUFA1O15239 70 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 AKR1D1P51857 326 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 KRTDAPP60985 99 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 C9orf163Q8N9P6 203 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 CARD19Q96LW7 228 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 PKD1P98161 4303 aa14.93□□□□□ -0.02
SREBF1-208ENST00000469356 C20orf202A1L168 122 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 SMIM1B2RUZ4 78 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 SPINK8P0C7L1 97 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 DNAH11Q96DT5 4516 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 IGKCP01834 107 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 C3orf79P0CE67 100 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 CXCL5P42830 114 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 CKS1BP61024 79 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 LINC00526Q96FQ7 95 aa14.92□□□□□ -0.02
SREBF1-208ENST00000469356 C5orf52A6NGY3 159 aa14.91□□□□□ -0.02
SREBF1-208ENST00000469356 FUSP35637 526 aaKnown RBP eCLIP14.91□□□□□ -0.02
SREBF1-208ENST00000469356 COX7B2Q8TF08 81 aa14.91□□□□□ -0.02
SREBF1-208ENST00000469356 HECTD4Q9Y4D8 3996 aa14.9□□□□□ -0.02
SREBF1-208ENST00000469356 KIAA0087Q14695 138 aa14.9□□□□□ -0.02
SREBF1-208ENST00000469356 HIST1H2BLQ99880 126 aa14.9□□□□□ -0.02
SREBF1-208ENST00000469356 SLPIP03973 132 aa14.89□□□□□ -0.03
SREBF1-208ENST00000469356 HERVK_113P61574 105 aa14.89□□□□□ -0.03
SREBF1-208ENST00000469356 LINC01545Q5VT33 79 aa14.89□□□□□ -0.03
SREBF1-208ENST00000469356 RNF151Q2KHN1 245 aa14.88□□□□□ -0.03
SREBF1-208ENST00000469356 TMEM223A0PJW6 202 aa14.87□□□□□ -0.03
SREBF1-208ENST00000469356 PMCHL2Q9BQD1 86 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms