RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 A8MZ25 164 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 PSCAO43653 123 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 ZNF415Q09FC8 603 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
SHQ1-205ENST00000468371 ZFAND3Q9H8U3 227 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 LENEPQ9Y5L5 61 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 SLC25A29Q8N8R3 303 aa4.36□□□□□ -1.71
SHQ1-205ENST00000468371 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 RHODO00212 210 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 CRPP02741 224 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV3-30-3P0DP02 117 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 ZNRF2Q8NHG8 242 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 Q9H8V8 135 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 NOP10Q9NPE3 64 aaKnown RBP4.35□□□□□ -1.71
SHQ1-205ENST00000468371 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 PFN2P35080 140 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 MRPL23Q16540 153 aaKnown RBP4.35□□□□□ -1.71
SHQ1-205ENST00000468371 FAM222AQ5U5X8 452 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 TM2D3Q9BRN9 247 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 OVOL2Q9BRP0 275 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 C19orf73Q9NVV2 129 aa4.35□□□□□ -1.71
SHQ1-205ENST00000468371 TGP01266 2768 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 TRBV10-2A0A0K0K1G8 114 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 TINCRA0A1B0GVN0 87 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 M0R2N4 97 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV3-33P01772 117 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 C16orf74Q96GX8 76 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 TIMM17AQ99595 171 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 A0A0J9YXY3 114 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 TRIAP1O43715 76 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 CNFNQ9BYD5 112 aa4.34□□□□□ -1.71
SHQ1-205ENST00000468371 A0A0J9YX75 114 aa4.34□□□□□ -1.72
SHQ1-205ENST00000468371 BAALC-AS2P0C853 105 aa4.34□□□□□ -1.72
SHQ1-205ENST00000468371 TSPEAR-AS2P59090 65 aa4.34□□□□□ -1.72
SHQ1-205ENST00000468371 RHOHQ15669 191 aa4.34□□□□□ -1.72
SHQ1-205ENST00000468371 IGLV2-18A0A075B6J9 118 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 CASC10Q5T4H9 136 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 C20orf203Q8NBC4 194 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 PRM2P04554 102 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 RPL36AP83881 106 aaKnown RBP4.33□□□□□ -1.72
SHQ1-205ENST00000468371 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
SHQ1-205ENST00000468371 DPH3Q96FX2 82 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 CDIP1Q9H305 208 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
SHQ1-205ENST00000468371 RNASE3P12724 160 aaKnown RBP4.33□□□□□ -1.72
SHQ1-205ENST00000468371 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
SHQ1-205ENST00000468371 SMCPP49901 116 aaPredicted RBP4.33□□□□□ -1.72
SHQ1-205ENST00000468371 RBMY1A1P0DJD3 496 aaKnown RBP4.32□□□□□ -1.72
SHQ1-205ENST00000468371 RBMY1CP0DJD4 496 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 LYRM9A8MSI8 78 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 UBE2D1P51668 147 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 Q9HAA7 133 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 NXPH4O95158 308 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 Q6ZTC4 211 aa4.32□□□□□ -1.72
SHQ1-205ENST00000468371 C6orf226Q5I0X4 101 aa4.31□□□□□ -1.72
SHQ1-205ENST00000468371 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
SHQ1-205ENST00000468371 DCANP1Q8TF63 244 aa4.31□□□□□ -1.72
SHQ1-205ENST00000468371 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
SHQ1-205ENST00000468371 PRO0461Q9UI25 63 aa4.31□□□□□ -1.72
SHQ1-205ENST00000468371 IGLV4-69A0A075B6H9 119 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 IGHV1-58A0A0C4DH39 117 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 UBE2D3P61077 147 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 UBE2D2P62837 147 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 U3KQE9 123 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 CDKN2A-AS1Q9UH64 79 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 IGHV4-4A0A075B6R2 117 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 IGIPA6NJ69 53 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 M0QY20 66 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 POLR2KP53803 58 aaKnown RBP4.3□□□□□ -1.72
SHQ1-205ENST00000468371 TMEM263Q8WUH6 116 aaKnown RBP4.3□□□□□ -1.72
SHQ1-205ENST00000468371 A0A096LPF7 62 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 H3BT86 120 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 CLPSL2Q6UWE3 100 aa4.3□□□□□ -1.72
SHQ1-205ENST00000468371 CRYGDP07320 174 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 MED14OSP0DP75 135 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 MIAQ16674 131 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 RPL32P62910 135 aaKnown RBP4.29□□□□□ -1.72
SHQ1-205ENST00000468371 C5orf38Q86SI9 138 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 A0A1B0GX51 115 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 SOCS3O14543 225 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 TSHBP01222 138 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 HERVK_113P63121 156 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 LAMTOR3Q9UHA4 124 aa4.29□□□□□ -1.72
SHQ1-205ENST00000468371 TRBV27A0A0K0K1C4 114 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 H7C423 109 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 TRACP01848 142 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 DAZ2Q13117 558 aaKnown RBP4.28□□□□□ -1.72
SHQ1-205ENST00000468371 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
SHQ1-205ENST00000468371 VSIG2Q96IQ7 327 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
SHQ1-205ENST00000468371 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms