RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-205ENST00000468338 C1orf196B1AJZ1 125 aa7.13□□□□□ -1.27
COL4A6-205ENST00000468338 PANO1I0J062 215 aa7.13□□□□□ -1.27
COL4A6-205ENST00000468338 INAFM2P0DMQ5 153 aa7.13□□□□□ -1.27
COL4A6-205ENST00000468338 VPREB1P12018 145 aa7.13□□□□□ -1.27
COL4A6-205ENST00000468338 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-205ENST00000468338 RPL39P62891 51 aaKnown RBP7.13□□□□□ -1.27
COL4A6-205ENST00000468338 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
COL4A6-205ENST00000468338 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
COL4A6-205ENST00000468338 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
COL4A6-205ENST00000468338 Q6ZUT4 128 aa7.12□□□□□ -1.27
COL4A6-205ENST00000468338 COMMD7Q86VX2 200 aa7.12□□□□□ -1.27
COL4A6-205ENST00000468338 SPANXA1Q9NS26 97 aa7.12□□□□□ -1.27
COL4A6-205ENST00000468338 IGHV3-64A0A075B6Q5 118 aa7.11□□□□□ -1.27
COL4A6-205ENST00000468338 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
COL4A6-205ENST00000468338 CARHSP1Q9Y2V2 147 aaKnown RBP7.11□□□□□ -1.27
COL4A6-205ENST00000468338 PYGO1Q9Y3Y4 419 aa7.11□□□□□ -1.27
COL4A6-205ENST00000468338 RNASE13Q5GAN3 156 aaKnown RBP7.1□□□□□ -1.27
COL4A6-205ENST00000468338 Q8N8P6 123 aa7.1□□□□□ -1.27
COL4A6-205ENST00000468338 MAP1LC3AQ9H492 121 aa7.1□□□□□ -1.27
COL4A6-205ENST00000468338 PAM16Q9Y3D7 125 aa7.1□□□□□ -1.27
COL4A6-205ENST00000468338 MYCBP2O75592 4640 aa7.1□□□□□ -1.27
COL4A6-205ENST00000468338 TRAV13-1A0A0B4J241 112 aa7.09□□□□□ -1.27
COL4A6-205ENST00000468338 K7EMI3 77 aa7.09□□□□□ -1.27
COL4A6-205ENST00000468338 RAB5AP20339 215 aa7.09□□□□□ -1.27
COL4A6-205ENST00000468338 OPRPNQ99935 248 aaPredicted RBP7.09□□□□□ -1.27
COL4A6-205ENST00000468338 IGHV3OR16-9A0A0B4J2B5 98 aa7.08□□□□□ -1.28
COL4A6-205ENST00000468338 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
COL4A6-205ENST00000468338 COX6A2Q02221 97 aa7.08□□□□□ -1.28
COL4A6-205ENST00000468338 SPACA4Q8TDM5 124 aa7.08□□□□□ -1.28
COL4A6-205ENST00000468338 IGLV4-3A0A075B6K6 122 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 COX7A2LO14548 114 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 CHTF8P0CG12 524 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 PRSS3P2Q8NHM4 247 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 LINC00526Q96FQ7 95 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 GNB1LQ9BYB4 327 aa7.07□□□□□ -1.28
COL4A6-205ENST00000468338 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
COL4A6-205ENST00000468338 A0A087WYN8 130 aa7.06□□□□□ -1.28
COL4A6-205ENST00000468338 IFI27P40305 119 aaPredicted RBP7.06□□□□□ -1.28
COL4A6-205ENST00000468338 RHEBQ15382 184 aa7.06□□□□□ -1.28
COL4A6-205ENST00000468338 ORMDL2Q53FV1 153 aa7.06□□□□□ -1.28
COL4A6-205ENST00000468338 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
COL4A6-205ENST00000468338 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
COL4A6-205ENST00000468338 IGIPA6NJ69 53 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 S100PP25815 95 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 SYCNQ0VAF6 134 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 COX19Q49B96 90 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 C2orf66Q6UXQ4 117 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 C5orf38Q86SI9 138 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 CARD19Q96LW7 228 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 AMELXQ99217 191 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 CYSLTR1Q9Y271 337 aa7.05□□□□□ -1.28
COL4A6-205ENST00000468338 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 APOMO95445 188 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 LINC00173Q6ZV60 143 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 TMEM141Q96I45 108 aa7.04□□□□□ -1.28
COL4A6-205ENST00000468338 A0A096LNI7 61 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 UBE2D1P51668 147 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 OR10D4PQ8NGN7 298 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 MPLKIPQ8TAP9 179 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
COL4A6-205ENST00000468338 RPS10P5Q9NQ39 176 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 PKIGQ9Y2B9 76 aa7.03□□□□□ -1.28
COL4A6-205ENST00000468338 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.28
COL4A6-205ENST00000468338 A0A087WZ39 114 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 F8WDY8 70 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 MT-ND6P03923 174 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 G0S2P27469 103 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 RPL37AP61513 92 aaKnown RBP7.02□□□□□ -1.29
COL4A6-205ENST00000468338 TEX43Q6ZNM6 134 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 Q6ZRU5 148 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 HERC1Q15751 4861 aa7.02□□□□□ -1.29
COL4A6-205ENST00000468338 IGKV2-24A0A0C4DH68 120 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
COL4A6-205ENST00000468338 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 MAJINQ3KP22 176 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 TOMM6Q96B49 74 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
COL4A6-205ENST00000468338 PKHD1L1Q86WI1 4243 aa7□□□□□ -1.29
COL4A6-205ENST00000468338 APOC3P02656 99 aa7□□□□□ -1.29
COL4A6-205ENST00000468338 SNRPEP62304 92 aaKnown RBP7□□□□□ -1.29
COL4A6-205ENST00000468338 ZC2HC1BQ5TFG8 222 aa7□□□□□ -1.29
COL4A6-205ENST00000468338 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
COL4A6-205ENST00000468338 VCX2Q9H322 139 aa7□□□□□ -1.29
COL4A6-205ENST00000468338 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
COL4A6-205ENST00000468338 TGIF2-C20orf24A0A0A6YYL0 155 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 LOC107984640A0A0U1RRK4 108 aa6.99□□□□□ -1.29
COL4A6-205ENST00000468338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms