RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 A0A1B0GWA3 101 aa0.48□□□□□ -2.33
SMC4-208ENST00000467468 TP53AIP1Q9HCN2 124 aa0.48□□□□□ -2.33
SMC4-208ENST00000467468 ANKRD36BQ8N2N9 1353 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 BIVM-ERCC5R4GMW8 1640 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 I3L2K1 104 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 SPINK1P00995 79 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 PMCHL2Q9BQD1 86 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 CACFD1Q9UGQ2 172 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 BTAF1O14981 1849 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 FYCO1Q9BQS8 1478 aa0.47□□□□□ -2.33
SMC4-208ENST00000467468 SCN7AQ01118 1682 aa0.46□□□□□ -2.34
SMC4-208ENST00000467468 LINC00846Q9NV44 126 aa0.46□□□□□ -2.34
SMC4-208ENST00000467468 ASXL3Q9C0F0 2248 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 ANK2Q01484 3957 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 A0A0G2JND7 137 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 ATOX1O00244 68 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 Q8IZM0 81 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 PRO1933Q9H354 126 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 ABCC10Q5T3U5 1492 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 MAGI1Q96QZ7 1491 aaPredicted RBP0.45□□□□□ -2.34
SMC4-208ENST00000467468 MLH3Q9UHC1 1453 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 CCNB3Q8WWL7 1395 aa0.45□□□□□ -2.34
SMC4-208ENST00000467468 ARHGEF12Q9NZN5 1544 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 TRBV25-1A0A075B6N4 114 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 TRBV6-1A0A0K0K1D8 114 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 H7BZZ5 65 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 PKIAP61925 76 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 TRGV9Q99603 122 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 USP24Q9UPU5 2620 aa0.44□□□□□ -2.34
SMC4-208ENST00000467468 COL5A1-AS1Q5SY13 56 aa0.43□□□□□ -2.34
SMC4-208ENST00000467468 SERP2Q8N6R1 65 aa0.43□□□□□ -2.34
SMC4-208ENST00000467468 LINC01600Q96MT4 127 aa0.43□□□□□ -2.34
SMC4-208ENST00000467468 FAM208BQ5VWN6 2430 aa0.43□□□□□ -2.34
SMC4-208ENST00000467468 ABCA12Q86UK0 2595 aa0.43□□□□□ -2.34
SMC4-208ENST00000467468 CELSR2Q9HCU4 2923 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 ZFHX3Q15911 3703 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 PMCHL1Q16048 86 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 PIGYQ3MUY2 71 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 VAMP8Q9BV40 100 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 SNHG12Q9BXW3 62 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 GPR98Q8WXG9 6306 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 PAPPAQ13219 1627 aa0.42□□□□□ -2.34
SMC4-208ENST00000467468 POLA1P09884 1462 aaPredicted RBP0.41□□□□□ -2.34
SMC4-208ENST00000467468 C1orf167Q5SNV9 1468 aa0.41□□□□□ -2.34
SMC4-208ENST00000467468 TPRP12270 2363 aaKnown RBP0.41□□□□□ -2.34
SMC4-208ENST00000467468 CACNA1EQ15878 2313 aa0.41□□□□□ -2.34
SMC4-208ENST00000467468 POLQO75417 2590 aa0.41□□□□□ -2.34
SMC4-208ENST00000467468 C7orf77A4D0Y5 90 aa0.41□□□□□ -2.34
SMC4-208ENST00000467468 NHSL1Q5SYE7 1610 aa0.41□□□□□ -2.34
SMC4-208ENST00000467468 TULP4Q9NRJ4 1543 aa0.4□□□□□ -2.35
SMC4-208ENST00000467468 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
SMC4-208ENST00000467468 WFDC2Q14508 124 aa0.4□□□□□ -2.35
SMC4-208ENST00000467468 FDCSPQ8NFU4 85 aa0.4□□□□□ -2.35
SMC4-208ENST00000467468 LCN9Q8WX39 176 aa0.4□□□□□ -2.35
SMC4-208ENST00000467468 NUP188Q5SRE5 1749 aa0.39□□□□□ -2.35
SMC4-208ENST00000467468 TRBV7-7A0A0K0K1E9 115 aa0.39□□□□□ -2.35
SMC4-208ENST00000467468 UQCRHP07919 91 aa0.39□□□□□ -2.35
SMC4-208ENST00000467468 PSMG4Q5JS54 123 aa0.39□□□□□ -2.35
SMC4-208ENST00000467468 DEFB123Q8N688 67 aa0.39□□□□□ -2.35
SMC4-208ENST00000467468 KMT2DO14686 5537 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 LRP1Q07954 4544 aaKnown RBP0.38□□□□□ -2.35
SMC4-208ENST00000467468 A0A087WVE0 104 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 TRBV7-4A0A0J9YYF1 115 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 LINC00959A0A1B0GUT2 108 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 ASIPP42127 132 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 U3KQA8 63 aa0.38□□□□□ -2.35
SMC4-208ENST00000467468 SYS1-DBNDD2H3BUS1 97 aa0.37□□□□□ -2.35
SMC4-208ENST00000467468 CFDP00746 253 aaPredicted RBP0.37□□□□□ -2.35
SMC4-208ENST00000467468 FAUP35544 74 aaKnown RBP0.37□□□□□ -2.35
SMC4-208ENST00000467468 Q5VSD8 79 aa0.37□□□□□ -2.35
SMC4-208ENST00000467468 ANKRD26Q9UPS8 1709 aa0.36□□□□□ -2.35
SMC4-208ENST00000467468 PDCD11Q14690 1871 aaKnown RBP0.36□□□□□ -2.35
SMC4-208ENST00000467468 PIEZO1Q92508 2521 aa0.36□□□□□ -2.35
SMC4-208ENST00000467468 FAT4Q6V0I7 4981 aa0.36□□□□□ -2.35
SMC4-208ENST00000467468 CACNA1CQ13936 2221 aa0.36□□□□□ -2.35
SMC4-208ENST00000467468 NRXN1Q9ULB1 1477 aa0.35□□□□□ -2.35
SMC4-208ENST00000467468 RAPGEF2Q9Y4G8 1499 aa0.35□□□□□ -2.35
SMC4-208ENST00000467468 FXYD6-FXYD2A0A087WZ82 144 aa0.35□□□□□ -2.35
SMC4-208ENST00000467468 TROQ12816 1431 aaPredicted RBP0.35□□□□□ -2.35
SMC4-208ENST00000467468 PLEKHH2Q8IVE3 1493 aa0.35□□□□□ -2.35
SMC4-208ENST00000467468 MYO7BQ6PIF6 2116 aa0.34□□□□□ -2.35
SMC4-208ENST00000467468 UQCRHLA0A096LP55 91 aa0.34□□□□□ -2.36
SMC4-208ENST00000467468 H3BQF6 201 aa0.34□□□□□ -2.36
SMC4-208ENST00000467468 XRN1Q8IZH2 1706 aaKnown RBP0.34□□□□□ -2.36
SMC4-208ENST00000467468 MARF1Q9Y4F3 1742 aaKnown RBP0.34□□□□□ -2.36
SMC4-208ENST00000467468 AKAP12Q02952 1782 aa0.34□□□□□ -2.36
SMC4-208ENST00000467468 NLRP1Q9C000 1473 aa0.34□□□□□ -2.36
SMC4-208ENST00000467468 ABCC2Q92887 1545 aa0.33□□□□□ -2.36
SMC4-208ENST00000467468 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
SMC4-208ENST00000467468 ARMS2P0C7Q2 107 aa0.33□□□□□ -2.36
SMC4-208ENST00000467468 A0A0G2JMZ2 1700 aa0.33□□□□□ -2.36
SMC4-208ENST00000467468 SETBP1Q9Y6X0 1596 aa0.32□□□□□ -2.36
SMC4-208ENST00000467468 COX6B1P14854 86 aa0.32□□□□□ -2.36
SMC4-208ENST00000467468 SPRR1AP35321 89 aa0.32□□□□□ -2.36
SMC4-208ENST00000467468 DEFB109BQ30KR1 87 aa0.32□□□□□ -2.36
SMC4-208ENST00000467468 PPRC1Q5VV67 1664 aaKnown RBP0.32□□□□□ -2.36
SMC4-208ENST00000467468 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
SMC4-208ENST00000467468 H0Y9P7 68 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms