RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
SCAP-209ENST00000465628 ORAOV1Q8WV07 137 aa9.88□□□□□ -0.83
SCAP-209ENST00000465628 IMMP2LQ96T52 175 aa9.88□□□□□ -0.83
SCAP-209ENST00000465628 PLAC8Q9NZF1 115 aa9.88□□□□□ -0.83
SCAP-209ENST00000465628 HERC1Q15751 4861 aa9.88□□□□□ -0.83
SCAP-209ENST00000465628 Q6ZN92 141 aa9.87□□□□□ -0.83
SCAP-209ENST00000465628 Q8N8P6 123 aa9.87□□□□□ -0.83
SCAP-209ENST00000465628 C2orf88Q9BSF0 95 aa9.87□□□□□ -0.83
SCAP-209ENST00000465628 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
SCAP-209ENST00000465628 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
SCAP-209ENST00000465628 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 ORMDL2Q53FV1 153 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 TEX43Q6ZNM6 134 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 Q6ZRU5 148 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 TMEM141Q96I45 108 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 SEC11CQ9BY50 192 aa9.86□□□□□ -0.83
SCAP-209ENST00000465628 IGLV4-3A0A075B6K6 122 aa9.85□□□□□ -0.83
SCAP-209ENST00000465628 LOC107984640A0A0U1RRK4 108 aa9.85□□□□□ -0.83
SCAP-209ENST00000465628 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
SCAP-209ENST00000465628 C2orf66Q6UXQ4 117 aa9.85□□□□□ -0.83
SCAP-209ENST00000465628 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
SCAP-209ENST00000465628 NXT2Q9NPJ8 142 aaKnown RBP9.85□□□□□ -0.83
SCAP-209ENST00000465628 TRAV9-1A0A075B6T8 112 aa9.84□□□□□ -0.83
SCAP-209ENST00000465628 C2orf48Q96LS8 159 aa9.84□□□□□ -0.83
SCAP-209ENST00000465628 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
SCAP-209ENST00000465628 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
SCAP-209ENST00000465628 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
SCAP-209ENST00000465628 KIAA1644Q3SXP7 199 aa9.83□□□□□ -0.84
SCAP-209ENST00000465628 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
SCAP-209ENST00000465628 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
SCAP-209ENST00000465628 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
SCAP-209ENST00000465628 K7EMI3 77 aa9.81□□□□□ -0.84
SCAP-209ENST00000465628 NDUFA1O15239 70 aa9.81□□□□□ -0.84
SCAP-209ENST00000465628 OXTP01178 125 aa9.81□□□□□ -0.84
SCAP-209ENST00000465628 VCX2Q9H322 139 aa9.81□□□□□ -0.84
SCAP-209ENST00000465628 A0A0J9YXV3 536 aa9.8□□□□□ -0.84
SCAP-209ENST00000465628 G0S2P27469 103 aa9.8□□□□□ -0.84
SCAP-209ENST00000465628 RPS10P5Q9NQ39 176 aa9.8□□□□□ -0.84
SCAP-209ENST00000465628 PKHD1L1Q86WI1 4243 aa9.8□□□□□ -0.84
SCAP-209ENST00000465628 RHEBQ15382 184 aa9.79□□□□□ -0.84
SCAP-209ENST00000465628 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
SCAP-209ENST00000465628 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
SCAP-209ENST00000465628 ZC2HC1BQ5TFG8 222 aa9.79□□□□□ -0.84
SCAP-209ENST00000465628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.78□□□□□ -0.84
SCAP-209ENST00000465628 UBE2D1P51668 147 aa9.78□□□□□ -0.84
SCAP-209ENST00000465628 PRR3P79522 188 aaKnown RBP9.78□□□□□ -0.84
SCAP-209ENST00000465628 GNB1LQ9BYB4 327 aa9.78□□□□□ -0.84
SCAP-209ENST00000465628 LRP1Q07954 4544 aaKnown RBP9.77□□□□□ -0.84
SCAP-209ENST00000465628 A0A087WZ39 114 aa9.77□□□□□ -0.85
SCAP-209ENST00000465628 F8WDY8 70 aa9.77□□□□□ -0.85
SCAP-209ENST00000465628 PRSS2P07478 247 aa9.77□□□□□ -0.85
SCAP-209ENST00000465628 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.85
SCAP-209ENST00000465628 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
SCAP-209ENST00000465628 MT-ND6P03923 174 aa9.76□□□□□ -0.85
SCAP-209ENST00000465628 FABP9Q0Z7S8 132 aa9.76□□□□□ -0.85
SCAP-209ENST00000465628 COX19Q49B96 90 aa9.76□□□□□ -0.85
SCAP-209ENST00000465628 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
SCAP-209ENST00000465628 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
SCAP-209ENST00000465628 TOMM7Q9P0U1 55 aa9.76□□□□□ -0.85
SCAP-209ENST00000465628 CARHSP1Q9Y2V2 147 aaKnown RBP9.76□□□□□ -0.85
SCAP-209ENST00000465628 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
SCAP-209ENST00000465628 NPSP0C0P6 89 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 RNF151Q2KHN1 245 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 SCGB3A1Q96QR1 104 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 AMELXQ99217 191 aa9.75□□□□□ -0.85
SCAP-209ENST00000465628 MRPL18Q9H0U6 180 aaKnown RBP9.75□□□□□ -0.85
SCAP-209ENST00000465628 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 SEC11AP67812 179 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
SCAP-209ENST00000465628 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 UNQ6190/PRO20217Q6UXQ8 127 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 TOMM6Q96B49 74 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 TIMM17AQ99595 171 aa9.74□□□□□ -0.85
SCAP-209ENST00000465628 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
SCAP-209ENST00000465628 Q6ZRP5 223 aa9.73□□□□□ -0.85
SCAP-209ENST00000465628 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
SCAP-209ENST00000465628 C6orf48Q9UBA6 75 aa9.73□□□□□ -0.85
SCAP-209ENST00000465628 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
SCAP-209ENST00000465628 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 APOC3P02656 99 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 CKS1BP61024 79 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 HERVK_113P63121 156 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 C10orf91Q5T1B1 145 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 C2orf82Q6UX34 121 aa9.72□□□□□ -0.85
SCAP-209ENST00000465628 ERASQ7Z444 233 aa9.71□□□□□ -0.86
SCAP-209ENST00000465628 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
SCAP-209ENST00000465628 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
SCAP-209ENST00000465628 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
SCAP-209ENST00000465628 LINC00469Q8N7U9 141 aa9.7□□□□□ -0.86
SCAP-209ENST00000465628 LINC01549A6NIU2 74 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 SNAPINO95295 136 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 C6orf226Q5I0X4 101 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
SCAP-209ENST00000465628 SVBPQ8N300 66 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
SCAP-209ENST00000465628 TLX1NBP0CAT3 122 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms