RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 C11orf86A6NJI1 115 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 F8VRH5 84 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 SS18Q15532 418 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 SPATA45Q537H7 98 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 ATOH7Q8N100 152 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 MIEN1Q9BRT3 115 aa11.55□□□□□ -0.56
PTPRU-206ENST00000465525 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
PTPRU-206ENST00000465525 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
PTPRU-206ENST00000465525 CHAC1Q9BUX1 264 aa11.54□□□□□ -0.56
PTPRU-206ENST00000465525 CTAG1AP78358 180 aa11.53□□□□□ -0.56
PTPRU-206ENST00000465525 IGKV2D-24A0A075B6R9 120 aa11.52□□□□□ -0.56
PTPRU-206ENST00000465525 IGLC3P0DOY3 106 aa11.52□□□□□ -0.56
PTPRU-206ENST00000465525 MIAQ16674 131 aa11.52□□□□□ -0.56
PTPRU-206ENST00000465525 GEMIN7Q9H840 131 aaKnown RBP11.52□□□□□ -0.56
PTPRU-206ENST00000465525 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.57
PTPRU-206ENST00000465525 DPM2O94777 84 aa11.52□□□□□ -0.57
PTPRU-206ENST00000465525 Q6ZR54 194 aa11.52□□□□□ -0.57
PTPRU-206ENST00000465525 KMT2CQ8NEZ4 4911 aaKnown RBP11.51□□□□□ -0.57
PTPRU-206ENST00000465525 TINCRA0A1B0GVN0 87 aa11.51□□□□□ -0.57
PTPRU-206ENST00000465525 HSBP1L1C9JCN9 74 aa11.51□□□□□ -0.57
PTPRU-206ENST00000465525 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
PTPRU-206ENST00000465525 SACSQ9NZJ4 4579 aa11.51□□□□□ -0.57
PTPRU-206ENST00000465525 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 IGKCP01834 107 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-206ENST00000465525 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 NFE4Q86UQ8 179 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 LINC00469Q8N7U9 141 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 KMT2AQ03164 3969 aa11.5□□□□□ -0.57
PTPRU-206ENST00000465525 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 TMEM170BQ5T4T1 132 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 CDKN2A-AS1Q9UH64 79 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 ZNF22P17026 224 aaPredicted RBP11.49□□□□□ -0.57
PTPRU-206ENST00000465525 PLNP26678 52 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
PTPRU-206ENST00000465525 HERVK_113P63121 156 aa11.48□□□□□ -0.57
PTPRU-206ENST00000465525 FOXI1Q12951 378 aa11.48□□□□□ -0.57
PTPRU-206ENST00000465525 HYDINQ4G0P3 5121 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 DNAH6Q9C0G6 4158 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 SEC11AP67812 179 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 MAJINQ3KP22 176 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
PTPRU-206ENST00000465525 IGHV3-64A0A075B6Q5 118 aa11.46□□□□□ -0.57
PTPRU-206ENST00000465525 SPINK8P0C7L1 97 aa11.46□□□□□ -0.57
PTPRU-206ENST00000465525 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.58
PTPRU-206ENST00000465525 hDV102S1A0JD36 115 aa11.46□□□□□ -0.58
PTPRU-206ENST00000465525 M0R143 59 aa11.46□□□□□ -0.58
PTPRU-206ENST00000465525 STPG4Q8N801 248 aa11.46□□□□□ -0.58
PTPRU-206ENST00000465525 MAPKAPK5-AS1Q8N8E1 139 aa11.45□□□□□ -0.58
PTPRU-206ENST00000465525 RMI2Q96E14 147 aa11.45□□□□□ -0.58
PTPRU-206ENST00000465525 COX7A2LO14548 114 aa11.44□□□□□ -0.58
PTPRU-206ENST00000465525 C1orf134Q5TEV5 83 aa11.43□□□□□ -0.58
PTPRU-206ENST00000465525 C6orf223Q8N319 242 aa11.43□□□□□ -0.58
PTPRU-206ENST00000465525 RYR2Q92736 4967 aa11.43□□□□□ -0.58
PTPRU-206ENST00000465525 A0A087WZ39 114 aa11.43□□□□□ -0.58
PTPRU-206ENST00000465525 HNRNPA3P51991 378 aaKnown RBP11.43□□□□□ -0.58
PTPRU-206ENST00000465525 TMEM223A0PJW6 202 aa11.42□□□□□ -0.58
PTPRU-206ENST00000465525 H3BRM9 83 aa11.42□□□□□ -0.58
PTPRU-206ENST00000465525 PSCAO43653 123 aa11.42□□□□□ -0.58
PTPRU-206ENST00000465525 MALP21145 153 aa11.42□□□□□ -0.58
PTPRU-206ENST00000465525 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
PTPRU-206ENST00000465525 LECT2O14960 151 aa11.41□□□□□ -0.58
PTPRU-206ENST00000465525 COX11Q9Y6N1 276 aa11.41□□□□□ -0.58
PTPRU-206ENST00000465525 ANKRD39Q53RE8 183 aa11.4□□□□□ -0.58
PTPRU-206ENST00000465525 Q6ZRN7 208 aaPredicted RBP11.4□□□□□ -0.58
PTPRU-206ENST00000465525 TM2D2Q9BX73 214 aa11.4□□□□□ -0.58
PTPRU-206ENST00000465525 SNHG12Q9BXW3 62 aa11.4□□□□□ -0.59
PTPRU-206ENST00000465525 WFDC2Q14508 124 aa11.38□□□□□ -0.59
PTPRU-206ENST00000465525 SLC25A34Q6PIV7 304 aa11.38□□□□□ -0.59
PTPRU-206ENST00000465525 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
PTPRU-206ENST00000465525 TOMM7Q9P0U1 55 aa11.38□□□□□ -0.59
PTPRU-206ENST00000465525 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
PTPRU-206ENST00000465525 HERVK_113P61574 105 aa11.37□□□□□ -0.59
PTPRU-206ENST00000465525 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
PTPRU-206ENST00000465525 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
PTPRU-206ENST00000465525 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
PTPRU-206ENST00000465525 USP17L23D6RBM5 183 aa11.36□□□□□ -0.59
PTPRU-206ENST00000465525 EREGO14944 169 aa11.36□□□□□ -0.59
PTPRU-206ENST00000465525 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
PTPRU-206ENST00000465525 IGHV1-58A0A0C4DH39 117 aa11.36□□□□□ -0.59
PTPRU-206ENST00000465525 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
PTPRU-206ENST00000465525 COX8AP10176 69 aa11.35□□□□□ -0.59
PTPRU-206ENST00000465525 DNAH2Q9P225 4427 aa11.35□□□□□ -0.59
PTPRU-206ENST00000465525 E9PLD3 99 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 RTL8CO15255 209 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 APOMO95445 188 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 NMUP48645 174 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 LINC01561Q8N1V8 128 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 TTTY13Q9BZ97 58 aa11.34□□□□□ -0.59
PTPRU-206ENST00000465525 LEPROTO15243 131 aa11.33□□□□□ -0.6
PTPRU-206ENST00000465525 SPAG11BQ08648 103 aa11.33□□□□□ -0.6
PTPRU-206ENST00000465525 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
PTPRU-206ENST00000465525 RYR3Q15413 4870 aa11.33□□□□□ -0.6
PTPRU-206ENST00000465525 DNAH10Q8IVF4 4471 aa11.32□□□□□ -0.6
PTPRU-206ENST00000465525 LRCOL1A6NCL2 159 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 J3QQQ9 107 aa11.31□□□□□ -0.6
PTPRU-206ENST00000465525 PRSS2P07478 247 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms