RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ORAOV1Q8WV07 137 aa13.93□□□□□ -0.18
USP42-205ENST00000465073 IMMP2LQ96T52 175 aa13.93□□□□□ -0.18
USP42-205ENST00000465073 IGHV3OR16-9A0A0B4J2B5 98 aa13.92□□□□□ -0.18
USP42-205ENST00000465073 FAM104AQ969W3 186 aa13.92□□□□□ -0.18
USP42-205ENST00000465073 SPANXA1Q9NS26 97 aa13.92□□□□□ -0.18
USP42-205ENST00000465073 TNFRSF6BO95407 300 aa13.91□□□□□ -0.18
USP42-205ENST00000465073 ADIRFQ15847 76 aa13.91□□□□□ -0.18
USP42-205ENST00000465073 hCG_2014768A0A024R1R8 64 aa13.9□□□□□ -0.18
USP42-205ENST00000465073 NDUFA1O15239 70 aa13.9□□□□□ -0.18
USP42-205ENST00000465073 MRPS36P82909 103 aaKnown RBP13.9□□□□□ -0.18
USP42-205ENST00000465073 SMIM2Q9BVW6 85 aa13.9□□□□□ -0.18
USP42-205ENST00000465073 DIRC1Q969H9 104 aa13.89□□□□□ -0.19
USP42-205ENST00000465073 NAT8Q9UHE5 227 aa13.89□□□□□ -0.19
USP42-205ENST00000465073 F8W036 122 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 IGLV7-43P04211 117 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 S100A8P05109 93 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 TLX1NBP0CAT3 122 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 HBBP68871 147 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 IFITM10A6NMD0 228 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 D6R8Y8 96 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 C10orf25Q5T742 122 aa13.87□□□□□ -0.19
USP42-205ENST00000465073 A0A087WZ39 114 aa13.86□□□□□ -0.19
USP42-205ENST00000465073 UNQ6190/PRO20217Q6UXQ8 127 aa13.86□□□□□ -0.19
USP42-205ENST00000465073 C9JQL5 133 aa13.85□□□□□ -0.19
USP42-205ENST00000465073 FAM168BA1KXE4 195 aa13.84□□□□□ -0.19
USP42-205ENST00000465073 NPYP01303 97 aa13.84□□□□□ -0.19
USP42-205ENST00000465073 PPBPP02775 128 aa13.84□□□□□ -0.19
USP42-205ENST00000465073 C6orf48Q9UBA6 75 aa13.84□□□□□ -0.19
USP42-205ENST00000465073 TGIF2-C20orf24A0A0A6YYL0 155 aa13.83□□□□□ -0.2
USP42-205ENST00000465073 MRPL54Q6P161 138 aaKnown RBP13.83□□□□□ -0.2
USP42-205ENST00000465073 PEA15Q15121 130 aa13.82□□□□□ -0.2
USP42-205ENST00000465073 PRR26Q8N8Z3 221 aa13.82□□□□□ -0.2
USP42-205ENST00000465073 A0A1B0GXF2 115 aa13.81□□□□□ -0.2
USP42-205ENST00000465073 H0Y9J4 135 aa13.81□□□□□ -0.2
USP42-205ENST00000465073 SMDT1Q9H4I9 107 aa13.81□□□□□ -0.2
USP42-205ENST00000465073 RAB5AP20339 215 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 FAM19A5Q7Z5A7 132 aaPredicted RBP13.8□□□□□ -0.2
USP42-205ENST00000465073 KRTAP11-1Q8IUC1 163 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 IFI27P40305 119 aaPredicted RBP13.8□□□□□ -0.2
USP42-205ENST00000465073 KIAA0087Q14695 138 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 PYGO1Q9Y3Y4 419 aa13.8□□□□□ -0.2
USP42-205ENST00000465073 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
USP42-205ENST00000465073 ORMDL3Q8N138 153 aa13.79□□□□□ -0.2
USP42-205ENST00000465073 LINC00242Q5T6M2 205 aa13.77□□□□□ -0.21
USP42-205ENST00000465073 IGLV1-50A0A075B6I6 118 aa13.76□□□□□ -0.21
USP42-205ENST00000465073 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
USP42-205ENST00000465073 TMEM136Q6ZRR5 245 aa13.76□□□□□ -0.21
USP42-205ENST00000465073 KRTAP7-1Q8IUC3 87 aa13.76□□□□□ -0.21
USP42-205ENST00000465073 IGLV4-3A0A075B6K6 122 aa13.75□□□□□ -0.21
USP42-205ENST00000465073 M0QXV9 152 aa13.75□□□□□ -0.21
USP42-205ENST00000465073 TMEM141Q96I45 108 aa13.75□□□□□ -0.21
USP42-205ENST00000465073 PRELID3AQ96N28 172 aa13.75□□□□□ -0.21
USP42-205ENST00000465073 ATP5L2Q7Z4Y8 100 aa13.74□□□□□ -0.21
USP42-205ENST00000465073 NDUFC2-KCTD14E9PQ53 114 aa13.74□□□□□ -0.21
USP42-205ENST00000465073 UBE2BP63146 152 aa13.74□□□□□ -0.21
USP42-205ENST00000465073 PACRGQ96M98 296 aaPredicted RBP13.74□□□□□ -0.21
USP42-205ENST00000465073 C2orf82Q6UX34 121 aa13.73□□□□□ -0.21
USP42-205ENST00000465073 LINC01561Q8N1V8 128 aa13.73□□□□□ -0.21
USP42-205ENST00000465073 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
USP42-205ENST00000465073 KRTAP1-4P0C5Y4 121 aa13.72□□□□□ -0.21
USP42-205ENST00000465073 TEX43Q6ZNM6 134 aa13.72□□□□□ -0.21
USP42-205ENST00000465073 UBE2D1P51668 147 aa13.7□□□□□ -0.22
USP42-205ENST00000465073 C2orf88Q9BSF0 95 aa13.7□□□□□ -0.22
USP42-205ENST00000465073 LAMTOR2Q9Y2Q5 125 aa13.7□□□□□ -0.22
USP42-205ENST00000465073 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
USP42-205ENST00000465073 LPAP08519 4548 aa13.68□□□□□ -0.22
USP42-205ENST00000465073 LOC389332A0A1B0GUA5 103 aa13.67□□□□□ -0.22
USP42-205ENST00000465073 Q6ZN92 141 aa13.67□□□□□ -0.22
USP42-205ENST00000465073 MAP1LC3AQ9H492 121 aa13.67□□□□□ -0.22
USP42-205ENST00000465073 RPL13AP40429 203 aaKnown RBP13.67□□□□□ -0.22
USP42-205ENST00000465073 CYSLTR1Q9Y271 337 aa13.67□□□□□ -0.22
USP42-205ENST00000465073 PRSS2P07478 247 aa13.66□□□□□ -0.22
USP42-205ENST00000465073 VCX2Q9H322 139 aa13.66□□□□□ -0.22
USP42-205ENST00000465073 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
USP42-205ENST00000465073 Q8N8P6 123 aa13.65□□□□□ -0.22
USP42-205ENST00000465073 AMELXQ99217 191 aa13.65□□□□□ -0.22
USP42-205ENST00000465073 NPSP0C0P6 89 aa13.64□□□□□ -0.23
USP42-205ENST00000465073 CKS1BP61024 79 aa13.64□□□□□ -0.23
USP42-205ENST00000465073 LINC00173Q6ZV60 143 aa13.64□□□□□ -0.23
USP42-205ENST00000465073 CARHSP1Q9Y2V2 147 aaKnown RBP13.64□□□□□ -0.23
USP42-205ENST00000465073 C6orf226Q5I0X4 101 aa13.63□□□□□ -0.23
USP42-205ENST00000465073 ZC2HC1BQ5TFG8 222 aa13.63□□□□□ -0.23
USP42-205ENST00000465073 ORMDL2Q53FV1 153 aa13.62□□□□□ -0.23
USP42-205ENST00000465073 TOMM7Q9P0U1 55 aa13.62□□□□□ -0.23
USP42-205ENST00000465073 ZNF861PO60384 105 aa13.61□□□□□ -0.23
USP42-205ENST00000465073 A0A1B0GVG6 124 aa13.61□□□□□ -0.23
USP42-205ENST00000465073 K7EMI3 77 aa13.61□□□□□ -0.23
USP42-205ENST00000465073 FAM19A3Q7Z5A8 133 aa13.61□□□□□ -0.23
USP42-205ENST00000465073 Q8IZM0 81 aa13.61□□□□□ -0.23
USP42-205ENST00000465073 IGIPA6NJ69 53 aa13.6□□□□□ -0.23
USP42-205ENST00000465073 LBHQ53QV2 105 aaPredicted RBP13.6□□□□□ -0.23
USP42-205ENST00000465073 LINC00469Q8N7U9 141 aa13.6□□□□□ -0.23
USP42-205ENST00000465073 ALKBH7Q9BT30 221 aaPredicted RBP13.6□□□□□ -0.23
USP42-205ENST00000465073 C22orf24Q9Y442 160 aa13.6□□□□□ -0.23
USP42-205ENST00000465073 NUPR1O60356 82 aa13.59□□□□□ -0.23
USP42-205ENST00000465073 PRR4Q16378 134 aa13.59□□□□□ -0.23
USP42-205ENST00000465073 SEC11AP67812 179 aa13.58□□□□□ -0.24
USP42-205ENST00000465073 MT-ND4LP03901 98 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms