RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ATP5G3P48201 142 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 UBE2L3P68036 154 aaKnown RBP2.6□□□□□ -1.99
UBR4-209ENST00000465036 LGALS9CQ6DKI2 356 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 AMN1Q8IY45 258 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 ZFAND2AQ8N6M9 145 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 MBD3L1Q8WWY6 194 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 PLEKHB2Q96CS7 222 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 TVP23CQ96ET8 276 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 HYLS1Q96M11 299 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 NOP10Q9NPE3 64 aaKnown RBP2.6□□□□□ -1.99
UBR4-209ENST00000465036 CYTL1Q9NRR1 136 aa2.6□□□□□ -1.99
UBR4-209ENST00000465036 FAT1Q14517 4588 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 TRBV20OR9-2A0A075B6H5 130 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 TMEM189A5PLL7 270 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 F6UZH7 168 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 H7BYZ3 331 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 GPX1P07203 203 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 GCHFRP30047 84 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 AKR1C3P42330 323 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 KHDC3LQ587J8 217 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 Q6ZTI0 123 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 SCXQ7RTU7 201 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 TMEM263Q8WUH6 116 aaKnown RBP2.59□□□□□ -1.99
UBR4-209ENST00000465036 RMI2Q96E14 147 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 ODF3Q96PU9 254 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 PSMG3Q9BT73 122 aaPredicted RBP2.59□□□□□ -1.99
UBR4-209ENST00000465036 OTORQ9NRC9 128 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 PHLDA3Q9Y5J5 127 aa2.59□□□□□ -1.99
UBR4-209ENST00000465036 IGLV2-18A0A075B6J9 118 aa2.58□□□□□ -2
UBR4-209ENST00000465036 TRAV9-1A0A075B6T8 112 aa2.58□□□□□ -2
UBR4-209ENST00000465036 A0A0J9YY99 117 aa2.58□□□□□ -2
UBR4-209ENST00000465036 GGTLC3B5MD39 225 aa2.58□□□□□ -2
UBR4-209ENST00000465036 M0R2N4 97 aa2.58□□□□□ -2
UBR4-209ENST00000465036 SLC25A5P05141 298 aaKnown RBP2.58□□□□□ -2
UBR4-209ENST00000465036 CSN1S1P47710 185 aa2.58□□□□□ -2
UBR4-209ENST00000465036 ZNF80P51504 273 aaPredicted RBP2.58□□□□□ -2
UBR4-209ENST00000465036 TAS2R45P59539 299 aa2.58□□□□□ -2
UBR4-209ENST00000465036 CKS1BP61024 79 aa2.58□□□□□ -2
UBR4-209ENST00000465036 FAM104BQ5XKR9 115 aa2.58□□□□□ -2
UBR4-209ENST00000465036 Q6Q795 121 aa2.58□□□□□ -2
UBR4-209ENST00000465036 LYPD1Q8N2G4 141 aa2.58□□□□□ -2
UBR4-209ENST00000465036 KCNRGQ8N5I3 272 aa2.58□□□□□ -2
UBR4-209ENST00000465036 NDFIP1Q9BT67 221 aa2.58□□□□□ -2
UBR4-209ENST00000465036 MRPL16Q9NX20 251 aaKnown RBP2.58□□□□□ -2
UBR4-209ENST00000465036 TIMM8BQ9Y5J9 83 aaPredicted RBP2.58□□□□□ -2
UBR4-209ENST00000465036 TRGV1A0A0A0MS02 117 aa2.57□□□□□ -2
UBR4-209ENST00000465036 BORCS7-ASMTA0A0B4J1R7 106 aa2.57□□□□□ -2
UBR4-209ENST00000465036 CTXND1A0A1B0GTU2 59 aa2.57□□□□□ -2
UBR4-209ENST00000465036 RBAKDNA6NC62 111 aa2.57□□□□□ -2
UBR4-209ENST00000465036 C9JCJ5 164 aa2.57□□□□□ -2
UBR4-209ENST00000465036 GNRH2O43555 120 aa2.57□□□□□ -2
UBR4-209ENST00000465036 IGHV3-53P01767 116 aa2.57□□□□□ -2
UBR4-209ENST00000465036 TCRAP04437 139 aa2.57□□□□□ -2
UBR4-209ENST00000465036 NMBP08949 121 aa2.57□□□□□ -2
UBR4-209ENST00000465036 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
UBR4-209ENST00000465036 SFTA3P0C7M3 94 aa2.57□□□□□ -2
UBR4-209ENST00000465036 NTF3P20783 257 aa2.57□□□□□ -2
UBR4-209ENST00000465036 S100A1P23297 94 aa2.57□□□□□ -2
UBR4-209ENST00000465036 SERF2P84101 59 aa2.57□□□□□ -2
UBR4-209ENST00000465036 Q6AWC8 147 aa2.57□□□□□ -2
UBR4-209ENST00000465036 TOMM6Q96B49 74 aa2.57□□□□□ -2
UBR4-209ENST00000465036 LINC00467Q9BRT7 94 aa2.57□□□□□ -2
UBR4-209ENST00000465036 ZNF471Q9BX82 626 aaPredicted RBP2.57□□□□□ -2
UBR4-209ENST00000465036 NKX6-2Q9C056 277 aaPredicted RBP2.57□□□□□ -2
UBR4-209ENST00000465036 SPANXCQ9NY87 97 aa2.57□□□□□ -2
UBR4-209ENST00000465036 EPDR1Q9UM22 224 aa2.57□□□□□ -2
UBR4-209ENST00000465036 NACAE9PAV3 2078 aa2.56□□□□□ -2
UBR4-209ENST00000465036 TRGV2A0A075B6R0 118 aa2.56□□□□□ -2
UBR4-209ENST00000465036 A0A087WX48 190 aa2.56□□□□□ -2
UBR4-209ENST00000465036 A0A096LNJ9 63 aa2.56□□□□□ -2
UBR4-209ENST00000465036 A0A1B0GVG6 124 aa2.56□□□□□ -2
UBR4-209ENST00000465036 HMSDA8MTL9 139 aa2.56□□□□□ -2
UBR4-209ENST00000465036 A8MWP4 228 aa2.56□□□□□ -2
UBR4-209ENST00000465036 J3KT08 172 aa2.56□□□□□ -2
UBR4-209ENST00000465036 SPINK4O60575 86 aa2.56□□□□□ -2
UBR4-209ENST00000465036 P0DMU3 169 aa2.56□□□□□ -2
UBR4-209ENST00000465036 FAM231AP0DMU4 169 aa2.56□□□□□ -2
UBR4-209ENST00000465036 FAM231CP0DMU5 169 aa2.56□□□□□ -2
UBR4-209ENST00000465036 CRIP1P50238 77 aa2.56□□□□□ -2
UBR4-209ENST00000465036 CCL20P78556 96 aa2.56□□□□□ -2
UBR4-209ENST00000465036 ZNF345Q14585 488 aa2.56□□□□□ -2
UBR4-209ENST00000465036 DEFB116Q30KQ4 102 aa2.56□□□□□ -2
UBR4-209ENST00000465036 LGALSLQ3ZCW2 172 aaPredicted RBP2.56□□□□□ -2
UBR4-209ENST00000465036 DPPA3Q6W0C5 159 aa2.56□□□□□ -2
UBR4-209ENST00000465036 UBE2DNLQ8IWF7 75 aa2.56□□□□□ -2
UBR4-209ENST00000465036 CYB561D1Q8N8Q1 229 aa2.56□□□□□ -2
UBR4-209ENST00000465036 DAND5Q8N907 189 aa2.56□□□□□ -2
UBR4-209ENST00000465036 C5orf17Q8NAS9 161 aa2.56□□□□□ -2
UBR4-209ENST00000465036 CMTM2Q8TAZ6 248 aa2.56□□□□□ -2
UBR4-209ENST00000465036 TMEM167BQ9NRX6 74 aa2.56□□□□□ -2
UBR4-209ENST00000465036 LINC00588Q9Y4M8 146 aa2.56□□□□□ -2
UBR4-209ENST00000465036 ARL2-SNX15V9GYD0 113 aa2.56□□□□□ -2
UBR4-209ENST00000465036 A0A096LPF7 62 aa2.55□□□□□ -2
UBR4-209ENST00000465036 TRAV21A0A0B4J279 112 aa2.55□□□□□ -2
UBR4-209ENST00000465036 A0A0D9SG52 128 aa2.55□□□□□ -2
UBR4-209ENST00000465036 KANTRA0A1W2PQU2 76 aa2.55□□□□□ -2
UBR4-209ENST00000465036 ESRGQ1W209 222 aa2.55□□□□□ -2
UBR4-209ENST00000465036 TDRG1Q3Y452 100 aa2.55□□□□□ -2
UBR4-209ENST00000465036 FAM74A1Q5RGS3 127 aa2.55□□□□□ -2
UBR4-209ENST00000465036 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms