RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 COLCA2A8K830 154 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 XGP55808 180 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 LINC00173Q6ZV60 143 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
SQSTM1-205ENST00000464493 TRGC2P03986 189 aa9.39□□□□□ -0.91
SQSTM1-205ENST00000464493 UBE2D1P51668 147 aa9.39□□□□□ -0.91
SQSTM1-205ENST00000464493 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
SQSTM1-205ENST00000464493 HERC2O95714 4834 aa9.39□□□□□ -0.91
SQSTM1-205ENST00000464493 RYR1P21817 5038 aa9.38□□□□□ -0.91
SQSTM1-205ENST00000464493 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
SQSTM1-205ENST00000464493 APOMO95445 188 aa9.38□□□□□ -0.91
SQSTM1-205ENST00000464493 SCO1O75880 301 aa9.37□□□□□ -0.91
SQSTM1-205ENST00000464493 COX6A2Q02221 97 aa9.37□□□□□ -0.91
SQSTM1-205ENST00000464493 Q6ZSA8 131 aa9.37□□□□□ -0.91
SQSTM1-205ENST00000464493 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
SQSTM1-205ENST00000464493 A0A096LNJ9 63 aa9.36□□□□□ -0.91
SQSTM1-205ENST00000464493 HBDP02042 147 aa9.36□□□□□ -0.91
SQSTM1-205ENST00000464493 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 A0A087WZ39 114 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 HAMPP81172 84 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 SDIM1Q6ZPB5 146 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 CHCHD1Q96BP2 118 aaKnown RBP9.35□□□□□ -0.91
SQSTM1-205ENST00000464493 IGLV4-69A0A075B6H9 119 aa9.34□□□□□ -0.91
SQSTM1-205ENST00000464493 SEC11AP67812 179 aa9.34□□□□□ -0.91
SQSTM1-205ENST00000464493 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
SQSTM1-205ENST00000464493 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
SQSTM1-205ENST00000464493 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
SQSTM1-205ENST00000464493 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
SQSTM1-205ENST00000464493 PMVKQ15126 192 aa9.33□□□□□ -0.92
SQSTM1-205ENST00000464493 ORAOV1Q8WV07 137 aa9.33□□□□□ -0.92
SQSTM1-205ENST00000464493 HERVK_113P63121 156 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 LINC01561Q8N1V8 128 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 Q8N1X5 172 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 C2orf48Q96LS8 159 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
SQSTM1-205ENST00000464493 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
SQSTM1-205ENST00000464493 ATP5LO75964 103 aa9.31□□□□□ -0.92
SQSTM1-205ENST00000464493 CAMK2N2Q96S95 79 aa9.31□□□□□ -0.92
SQSTM1-205ENST00000464493 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
SQSTM1-205ENST00000464493 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 NDUFA6P56556 154 aa9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 CDKN2A-AS1Q9UH64 79 aa9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.3□□□□□ -0.92
SQSTM1-205ENST00000464493 HSBP1O75506 76 aa9.29□□□□□ -0.92
SQSTM1-205ENST00000464493 Q6ZRU5 148 aa9.29□□□□□ -0.92
SQSTM1-205ENST00000464493 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
SQSTM1-205ENST00000464493 F8WDY8 70 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 PANO1I0J062 215 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 S100A1P23297 94 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 DPH3Q96FX2 82 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 PKIGQ9Y2B9 76 aa9.28□□□□□ -0.92
SQSTM1-205ENST00000464493 FAT1Q14517 4588 aa9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 SERF1AO75920 110 aa9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 CIRBPQ14011 172 aaKnown RBP9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 LINC00469Q8N7U9 141 aa9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 PACRGQ96M98 296 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1-205ENST00000464493 IGLV5-45A0A087WSX0 123 aa9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 NDUFA1O15239 70 aa9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 CHTF8P0CG12 524 aa9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 IFI27L1Q96BM0 104 aa9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 KRTAP4-5Q9BYR2 181 aa9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
SQSTM1-205ENST00000464493 IGKV2-24A0A0C4DH68 120 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 EPM2AB3EWF7 344 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 PRSS2P07478 247 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 IGLC3P0DOY3 106 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 LINC00310P59036 64 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 RNF151Q2KHN1 245 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
SQSTM1-205ENST00000464493 A0A096LNI7 61 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 NUPR1O60356 82 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 ATP6V1G1O75348 118 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 C6orf226Q5I0X4 101 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 C10orf25Q5T742 122 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
SQSTM1-205ENST00000464493 H3BRM9 83 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
SQSTM1-205ENST00000464493 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms