RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 KRTAP7-1Q8IUC3 87 aa10.36□□□□□ -0.75
HMGN1-210ENST00000464078 SMIM7Q9BQ49 75 aa10.36□□□□□ -0.75
HMGN1-210ENST00000464078 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
HMGN1-210ENST00000464078 TCAPO15273 167 aa10.35□□□□□ -0.75
HMGN1-210ENST00000464078 UBE2D1P51668 147 aa10.35□□□□□ -0.75
HMGN1-210ENST00000464078 PRR4Q16378 134 aa10.35□□□□□ -0.75
HMGN1-210ENST00000464078 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
HMGN1-210ENST00000464078 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
HMGN1-210ENST00000464078 TRBV24-1A0A075B6N3 115 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 M0QXV9 152 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 CEBPGP53567 150 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 BLOC1S1P78537 153 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
HMGN1-210ENST00000464078 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 KRTAP9-2Q9BYQ4 174 aa10.34□□□□□ -0.75
HMGN1-210ENST00000464078 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
HMGN1-210ENST00000464078 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
HMGN1-210ENST00000464078 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
HMGN1-210ENST00000464078 CARHSP1Q9Y2V2 147 aaKnown RBP10.33□□□□□ -0.76
HMGN1-210ENST00000464078 V9GYV3 84 aa10.33□□□□□ -0.76
HMGN1-210ENST00000464078 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
HMGN1-210ENST00000464078 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
HMGN1-210ENST00000464078 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
HMGN1-210ENST00000464078 IFITM10A6NMD0 228 aa10.31□□□□□ -0.76
HMGN1-210ENST00000464078 UBE2BP63146 152 aa10.31□□□□□ -0.76
HMGN1-210ENST00000464078 TRBV30A0A0K0K1B3 111 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 HBBP68871 147 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 KIAA0087Q14695 138 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
HMGN1-210ENST00000464078 TGIF2-C20orf24A0A0A6YYL0 155 aa10.29□□□□□ -0.76
HMGN1-210ENST00000464078 NDUFC2-KCTD14E9PQ53 114 aa10.29□□□□□ -0.76
HMGN1-210ENST00000464078 ALKAL2Q6UX46 152 aa10.29□□□□□ -0.76
HMGN1-210ENST00000464078 A0A1B0GW15 77 aa10.27□□□□□ -0.77
HMGN1-210ENST00000464078 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
HMGN1-210ENST00000464078 CKS2P33552 79 aa10.27□□□□□ -0.77
HMGN1-210ENST00000464078 C9orf129Q5T035 196 aaKnown RBP10.27□□□□□ -0.77
HMGN1-210ENST00000464078 EIF5A2Q9GZV4 153 aaKnown RBP10.27□□□□□ -0.77
HMGN1-210ENST00000464078 ZNF861PO60384 105 aa10.26□□□□□ -0.77
HMGN1-210ENST00000464078 FAM74A3Q4VXF1 159 aa10.26□□□□□ -0.77
HMGN1-210ENST00000464078 LCE2AQ5TA79 106 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-210ENST00000464078 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
HMGN1-210ENST00000464078 LINC00242Q5T6M2 205 aa10.25□□□□□ -0.77
HMGN1-210ENST00000464078 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
HMGN1-210ENST00000464078 C2orf82Q6UX34 121 aa10.24□□□□□ -0.77
HMGN1-210ENST00000464078 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
HMGN1-210ENST00000464078 NUPR1O60356 82 aa10.23□□□□□ -0.77
HMGN1-210ENST00000464078 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-210ENST00000464078 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
HMGN1-210ENST00000464078 PACRGQ96M98 296 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-210ENST00000464078 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
HMGN1-210ENST00000464078 D6R8Y8 96 aa10.22□□□□□ -0.77
HMGN1-210ENST00000464078 NPYP01303 97 aa10.22□□□□□ -0.77
HMGN1-210ENST00000464078 LCE2DQ5TA82 110 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-210ENST00000464078 PPBPP02775 128 aa10.21□□□□□ -0.77
HMGN1-210ENST00000464078 RPL23P62829 140 aaKnown RBP10.21□□□□□ -0.77
HMGN1-210ENST00000464078 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
HMGN1-210ENST00000464078 S100A8P05109 93 aa10.2□□□□□ -0.78
HMGN1-210ENST00000464078 A0A087X002 238 aa10.19□□□□□ -0.78
HMGN1-210ENST00000464078 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
HMGN1-210ENST00000464078 F8W036 122 aa10.19□□□□□ -0.78
HMGN1-210ENST00000464078 TMEM141Q96I45 108 aa10.19□□□□□ -0.78
HMGN1-210ENST00000464078 TSPAN13O95857 204 aa10.18□□□□□ -0.78
HMGN1-210ENST00000464078 ADIRFQ15847 76 aa10.18□□□□□ -0.78
HMGN1-210ENST00000464078 RAB5AP20339 215 aa10.17□□□□□ -0.78
HMGN1-210ENST00000464078 LBHQ53QV2 105 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-210ENST00000464078 TP73-AS1Q9UF72 201 aa10.17□□□□□ -0.78
HMGN1-210ENST00000464078 NAT8Q9UHE5 227 aa10.17□□□□□ -0.78
HMGN1-210ENST00000464078 C22orf24Q9Y442 160 aa10.17□□□□□ -0.78
HMGN1-210ENST00000464078 MRPL54Q6P161 138 aaKnown RBP10.16□□□□□ -0.78
HMGN1-210ENST00000464078 TEX43Q6ZNM6 134 aa10.16□□□□□ -0.78
HMGN1-210ENST00000464078 ORMDL3Q8N138 153 aa10.16□□□□□ -0.78
HMGN1-210ENST00000464078 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
HMGN1-210ENST00000464078 CRYGAP11844 174 aa10.15□□□□□ -0.78
HMGN1-210ENST00000464078 RPL28P46779 137 aaKnown RBP10.15□□□□□ -0.78
HMGN1-210ENST00000464078 Q8IZM0 81 aa10.15□□□□□ -0.78
HMGN1-210ENST00000464078 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
HMGN1-210ENST00000464078 BCE1O60756 84 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 PRSS2P07478 247 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 CKS1BP61024 79 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 Q6ZN92 141 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
HMGN1-210ENST00000464078 MRPL55Q7Z7F7 128 aaKnown RBP10.13□□□□□ -0.79
HMGN1-210ENST00000464078 AKAP14Q86UN6 197 aa10.13□□□□□ -0.79
HMGN1-210ENST00000464078 LINC00469Q8N7U9 141 aa10.13□□□□□ -0.79
HMGN1-210ENST00000464078 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
HMGN1-210ENST00000464078 KRTAP9-6A0A140TA67 174 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 PRSS47A8MTI9 375 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 NPSP0C0P6 89 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 AMELXQ99217 191 aa10.12□□□□□ -0.79
HMGN1-210ENST00000464078 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
HMGN1-210ENST00000464078 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
HMGN1-210ENST00000464078 ATP5L2Q7Z4Y8 100 aa10.11□□□□□ -0.79
HMGN1-210ENST00000464078 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
HMGN1-210ENST00000464078 CYSLTR1Q9Y271 337 aa10.11□□□□□ -0.79
HMGN1-210ENST00000464078 LAMTOR2Q9Y2Q5 125 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms