RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PDCD5O14737 125 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 SNRPFP62306 86 aaKnown RBP1.65□□□□□ -2.15
ITGB1-208ENST00000464001 PSMG4Q5JS54 123 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 CFAP126Q5VTH2 177 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 Q86TA4 180 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 ZNF563Q8TA94 476 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 R4GMQ9 66 aa1.65□□□□□ -2.15
ITGB1-208ENST00000464001 SHPRHQ149N8 1683 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 RGPD1P0DJD0 1748 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 ZNF815PA8K554 130 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 M0R135 149 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 CFDP00746 253 aaPredicted RBP1.64□□□□□ -2.15
ITGB1-208ENST00000464001 Q6ZQY7 126 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 Q96NJ1 140 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 CCL19Q99731 98 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 WFDC6Q9BQY6 131 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 MADDQ8WXG6 1647 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 KCPQ6ZWJ8 1503 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 ANKARQ7Z5J8 1434 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 C5P01031 1676 aa1.64□□□□□ -2.15
ITGB1-208ENST00000464001 INO80Q9ULG1 1556 aaPredicted RBP1.64□□□□□ -2.15
ITGB1-208ENST00000464001 PAPPA2Q9BXP8 1791 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 KANTRA0A1W2PQU2 76 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 F8VRH5 84 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 M0R3E3 92 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 BCE1O60756 84 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 SAA2P0DJI9 122 aaPredicted RBP1.63□□□□□ -2.15
ITGB1-208ENST00000464001 PCOTHQ58A44 107 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 UNQ6190/PRO20217Q6UXQ8 127 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 PPP1R1CQ8WVI7 109 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 LINC01600Q96MT4 127 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 AMELXQ99217 191 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 PRR15LQ9BU68 103 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 PSENENQ9NZ42 101 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 DNAJC13O75165 2243 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 BAHCC1Q9P281 2608 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 NCOA2Q15596 1464 aa1.63□□□□□ -2.15
ITGB1-208ENST00000464001 MAGI3Q5TCQ9 1506 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 CACNA1CQ13936 2221 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 TRGV1A0A0A0MS02 117 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 TRAV1-2A0A0B4J238 106 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 CTXND1A0A1B0GTU2 59 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 CAV3P56539 151 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 SMIM11AP58511 58 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 LINC00643Q86TS7 51 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 FDCSPQ8NFU4 85 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 NHSL1Q5SYE7 1610 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 F5P12259 2224 aa1.62□□□□□ -2.15
ITGB1-208ENST00000464001 PLXNB2O15031 1838 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 ZMYM4Q5VZL5 1548 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 ABCC2Q92887 1545 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 THOC2Q8NI27 1593 aaKnown RBP1.61□□□□□ -2.15
ITGB1-208ENST00000464001 HMGN2P05204 90 aaKnown RBP1.61□□□□□ -2.15
ITGB1-208ENST00000464001 ZNF137PP52743 207 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 BAGE3Q86Y29 109 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 BAGE2Q86Y30 109 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 ALKQ9UM73 1620 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 ABCC1P33527 1531 aa1.61□□□□□ -2.15
ITGB1-208ENST00000464001 MUC6Q6W4X9 2439 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 A0A087WVE0 104 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 C7orf77A4D0Y5 90 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 IQCF6A8MYZ5 107 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 ARMS2P0C7Q2 107 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 SPINT3P49223 89 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 LRRC9Q6ZRR7 1453 aa1.6□□□□□ -2.15
ITGB1-208ENST00000464001 TARBP1Q13395 1621 aaKnown RBP1.59□□□□□ -2.15
ITGB1-208ENST00000464001 RAPGEF6Q8TEU7 1601 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 ZNF831Q5JPB2 1677 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 UQCR11O14957 56 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 ACYP1P07311 99 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 ACYP2P14621 99 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 KRTAP12-1P59990 96 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 C18orf32Q8TCD1 76 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 PROK2Q9HC23 129 aa1.59□□□□□ -2.15
ITGB1-208ENST00000464001 COL14A1Q05707 1796 aaKnown RBP1.59□□□□□ -2.16
ITGB1-208ENST00000464001 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.16
ITGB1-208ENST00000464001 HMCN1Q96RW7 5635 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 PLCH1Q4KWH8 1693 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 TIAM2Q8IVF5 1701 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 CADP27708 2225 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 A0A1B0GWA3 101 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
ITGB1-208ENST00000464001 UBR3Q6ZT12 1888 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 PIK3C2BO00750 1634 aa1.58□□□□□ -2.16
ITGB1-208ENST00000464001 PARP4Q9UKK3 1724 aaKnown RBP1.57□□□□□ -2.16
ITGB1-208ENST00000464001 CUX1P39880 1505 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 SETBP1Q9Y6X0 1596 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 MYMXA0A1B0GTQ4 84 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 LEPROTL1O95214 131 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 CACNA1BQ00975 2339 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 LRRC37A2A6NM11 1700 aa1.57□□□□□ -2.16
ITGB1-208ENST00000464001 SSC5DA1L4H1 1573 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 CCDC180Q9P1Z9 1646 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 HEPN1Q6WQI6 88 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 BCORQ6W2J9 1755 aa1.56□□□□□ -2.16
ITGB1-208ENST00000464001 CEP170BQ9Y4F5 1589 aaPredicted RBP1.55□□□□□ -2.16
ITGB1-208ENST00000464001 WIZO95785 1651 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms