RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.4□□□□□ -1.23
SSBP1-202ENST00000461433 COX6A2Q02221 97 aa7.4□□□□□ -1.23
SSBP1-202ENST00000461433 PAPPA-AS1Q5QFB9 102 aa7.4□□□□□ -1.23
SSBP1-202ENST00000461433 LINC00242Q5T6M2 205 aa7.4□□□□□ -1.23
SSBP1-202ENST00000461433 FAM19A3Q7Z5A8 133 aa7.4□□□□□ -1.23
SSBP1-202ENST00000461433 IGHV3OR16-9A0A0B4J2B5 98 aa7.39□□□□□ -1.23
SSBP1-202ENST00000461433 FUSP35637 526 aaKnown RBP eCLIP7.39□□□□□ -1.235e-7■□□□□ 8.7
SSBP1-202ENST00000461433 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
SSBP1-202ENST00000461433 CST9LQ9H4G1 147 aa7.39□□□□□ -1.23
SSBP1-202ENST00000461433 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
SSBP1-202ENST00000461433 C15orf56Q8N910 161 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 EREGO14944 169 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 ATP5LO75964 103 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 PRSS1P07477 247 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 PMVKQ15126 192 aa7.38□□□□□ -1.23
SSBP1-202ENST00000461433 A0A0J9YXV3 536 aa7.37□□□□□ -1.23
SSBP1-202ENST00000461433 C5orf38Q86SI9 138 aa7.37□□□□□ -1.23
SSBP1-202ENST00000461433 PKHD1P08F94 4074 aa7.37□□□□□ -1.23
SSBP1-202ENST00000461433 COX7A2LO14548 114 aa7.36□□□□□ -1.23
SSBP1-202ENST00000461433 NDUFA6P56556 154 aa7.36□□□□□ -1.23
SSBP1-202ENST00000461433 NTN5Q8WTR8 489 aaPredicted RBP7.36□□□□□ -1.23
SSBP1-202ENST00000461433 IFI27L1Q96BM0 104 aa7.36□□□□□ -1.23
SSBP1-202ENST00000461433 PGPEP1Q9NXJ5 209 aa7.36□□□□□ -1.23
SSBP1-202ENST00000461433 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-202ENST00000461433 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 A0A087WZ39 114 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 GVQW2A0A096LPI5 108 aaPredicted RBP7.35□□□□□ -1.23
SSBP1-202ENST00000461433 IGHV1-58A0A0C4DH39 117 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 LEPROTL1O95214 131 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 SLPIP03973 132 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 C14orf177Q52M58 125 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 CFAP161Q6P656 301 aa7.35□□□□□ -1.23
SSBP1-202ENST00000461433 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 TINCRA0A1B0GVN0 87 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 hDV102S1A0JD36 115 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 FABP4P15090 132 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 HERVK_113P63121 156 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 HIGD2BQ4VC39 106 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 CDPF1Q6NVV7 123 aa7.34□□□□□ -1.23
SSBP1-202ENST00000461433 IGLV5-45A0A087WSX0 123 aa7.33□□□□□ -1.24
SSBP1-202ENST00000461433 TRAV12-1A0A0B4J245 112 aa7.33□□□□□ -1.24
SSBP1-202ENST00000461433 MALP21145 153 aa7.33□□□□□ -1.24
SSBP1-202ENST00000461433 SEC11AP67812 179 aa7.33□□□□□ -1.24
SSBP1-202ENST00000461433 CDKN2A-AS1Q9UH64 79 aa7.33□□□□□ -1.24
SSBP1-202ENST00000461433 IGHV3-64A0A075B6Q5 118 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 IGLC3P0DOY3 106 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 LINC00526Q96FQ7 95 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
SSBP1-202ENST00000461433 HSPB8Q9UJY1 196 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 DNAH5Q8TE73 4624 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
SSBP1-202ENST00000461433 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
SSBP1-202ENST00000461433 C16orf90A8MZG2 172 aa7.31□□□□□ -1.24
SSBP1-202ENST00000461433 APOMO95445 188 aa7.31□□□□□ -1.24
SSBP1-202ENST00000461433 CHTOPQ9Y3Y2 248 aaKnown RBP7.31□□□□□ -1.24
SSBP1-202ENST00000461433 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 KIAA0087Q14695 138 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 ODF1Q14990 250 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 LINC01620Q4KN68 170 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 LINC00469Q8N7U9 141 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 ORAOV1Q8WV07 137 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
SSBP1-202ENST00000461433 CHAC1Q9BUX1 264 aa7.3□□□□□ -1.24
SSBP1-202ENST00000461433 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
SSBP1-202ENST00000461433 F8VRH5 84 aa7.29□□□□□ -1.24
SSBP1-202ENST00000461433 ZNF22P17026 224 aaPredicted RBP7.29□□□□□ -1.24
SSBP1-202ENST00000461433 GCSHP23434 173 aa7.29□□□□□ -1.24
SSBP1-202ENST00000461433 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
SSBP1-202ENST00000461433 C9orf163Q8N9P6 203 aa7.29□□□□□ -1.24
SSBP1-202ENST00000461433 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
SSBP1-202ENST00000461433 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 H0Y8G0 127 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 SPAG11BQ08648 103 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 HIST3H2BBQ8N257 126 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 C2orf48Q96LS8 159 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 MAP1LC3CQ9BXW4 147 aa7.28□□□□□ -1.24
SSBP1-202ENST00000461433 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
SSBP1-202ENST00000461433 SPINK8P0C7L1 97 aa7.27□□□□□ -1.25
SSBP1-202ENST00000461433 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
SSBP1-202ENST00000461433 Q6ZRU5 148 aa7.26□□□□□ -1.25
SSBP1-202ENST00000461433 LRP1BQ9NZR2 4599 aa7.26□□□□□ -1.25
SSBP1-202ENST00000461433 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.25□□□□□ -1.25
SSBP1-202ENST00000461433 IGLV5-39A0A0G2JS06 123 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 C5orf52A6NGY3 159 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 H3BRM9 83 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 S100A6P06703 90 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 C3orf79P0CE67 100 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
SSBP1-202ENST00000461433 TMEM170BQ5T4T1 132 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 SDIM1Q6ZPB5 146 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 Q8IZM0 81 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 PMCHL2Q9BQD1 86 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 F8WDY8 70 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
SSBP1-202ENST00000461433 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms