RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2L3P68036 154 aaKnown RBP3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 LINC00643Q86TS7 51 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 GTSCR1Q86UQ5 136 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 TRGV9Q99603 122 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 RNASE7Q9H1E1 156 aaKnown RBP3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 ZNF492Q9P255 531 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 SERP1Q9Y6X1 66 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 UBR4Q5T4S7 5183 aa3.47□□□□□ -1.85
ATPAF1-203ENST00000460928 SMIM26A0A096LP01 95 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 TRAV8-1A0A0A6YYK1 113 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 H3BMM0 161 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 H7C1H1 209 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 K7EIL1 84 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 K7EQG2 157 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 K7ERJ3 54 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 HBDP02042 147 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 LEPP41159 167 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 DEFB1P60022 68 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 Q6ZQT7 251 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 ZNF493Q6ZR52 646 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 LINC00173Q6ZV60 143 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 C5orf38Q86SI9 138 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 GPHB5Q86YW7 130 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 TMEM61Q8N0U2 210 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 UBE2WQ96B02 151 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 IGF2BP2-AS1Q96M15 143 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 CHCHD5Q9BSY4 110 aa3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 HUWE1Q7Z6Z7 4374 aaKnown RBP3.46□□□□□ -1.86
ATPAF1-203ENST00000460928 IGHV7-4-1A0A0J9YVY3 117 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 A0A0U1RQV1 116 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 FAM236DA0A1B0GTK5 79 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 LINC01546A6NGU7 62 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 IGLV1-51P01701 117 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 IGLV2-8P01709 118 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 ARL14EPLP0DKL9 152 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 FAM236CP0DP71 79 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 PSMB2P49721 201 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 LYZP61626 148 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 NPC2P61916 151 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 PMAIP1Q13794 54 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 DEFB114Q30KQ6 69 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 C9orf66Q5T8R8 295 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 MIC13Q5XKP0 118 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 PATE2Q6UY27 113 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 SDIM1Q6ZPB5 146 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 PCP2Q8IVA1 136 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 DYNLRB2Q8TF09 96 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 PKIGQ9Y2B9 76 aa3.45□□□□□ -1.86
ATPAF1-203ENST00000460928 IGLV7-46A0A075B6I9 117 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 TRBV10-2A0A0K0K1G8 114 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 NDUFA4O00483 81 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 CFC1BP0CG36 223 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 CFC1P0CG37 223 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 CACNG7P62955 275 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 ATXN8Q156A1 80 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 KPRPQ5T749 579 aaPredicted RBP3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 GDF5OSQ5U4N7 250 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
ATPAF1-203ENST00000460928 C19orf71A6NCJ1 209 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 PGPA6NDG6 321 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 HIGD1CA8MV81 97 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 BCE1O60756 84 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 TCL1BO95988 128 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 EGFEM1PQ0D2K5 195 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 Q6ZRU5 148 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 PRR15Q8IV56 129 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 EXOC3-AS1Q8N2X6 119 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 FAM19A4Q96LR4 140 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 NXT2Q9NPJ8 142 aaKnown RBP3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 DAZ1Q9NQZ3 744 aaKnown RBP3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 SMAD5-AS1Q9Y6J3 95 aa3.43□□□□□ -1.86
ATPAF1-203ENST00000460928 DNAH7Q8WXX0 4024 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 IGLV4-3A0A075B6K6 122 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 TRAV26-2A0A0B4J265 109 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 LOC107984156A0A0G2JMH3 177 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 TRBV7-6A0A0J9YX20 115 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 KNCNA6PVL3 124 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 K7EMT4 169 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 SPINK4O60575 86 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 OXTP01178 125 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 PLNP26678 52 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 LINC00242Q5T6M2 205 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 MIR17HGQ75NE6 70 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 ARL17AQ8IVW1 177 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 OR8A1Q8NGG7 326 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 METTL26Q96S19 204 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 UPK3BQ9BT76 320 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 DPH3P1Q9H4G8 78 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 RETNQ9HD89 108 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 HHLA3Q9XRX5 114 aa3.42□□□□□ -1.86
ATPAF1-203ENST00000460928 U3KQK5 164 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms