RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 CLEC2BQ92478 149 aa12.74□□□□□ -0.37
CHRD-208ENST00000460627 TET2Q6N021 2002 aaPredicted RBP12.73□□□□□ -0.37
CHRD-208ENST00000460627 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
CHRD-208ENST00000460627 FSHBP01225 129 aa12.73□□□□□ -0.37
CHRD-208ENST00000460627 TMEM256-PLSCR3K7ERE1 68 aa12.73□□□□□ -0.37
CHRD-208ENST00000460627 hADV29S1A0JD25 119 aa12.72□□□□□ -0.37
CHRD-208ENST00000460627 WFDC2Q14508 124 aa12.71□□□□□ -0.37
CHRD-208ENST00000460627 RETNQ9HD89 108 aa12.71□□□□□ -0.38
CHRD-208ENST00000460627 FHL3Q13643 280 aa12.7□□□□□ -0.38
CHRD-208ENST00000460627 FHL2Q14192 279 aa12.7□□□□□ -0.38
CHRD-208ENST00000460627 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
CHRD-208ENST00000460627 TP73-AS1Q9UF72 201 aa12.7□□□□□ -0.38
CHRD-208ENST00000460627 RANBP2P49792 3224 aaKnown RBP12.7□□□□□ -0.38
CHRD-208ENST00000460627 TRACP01848 142 aa12.7□□□□□ -0.38
CHRD-208ENST00000460627 PDE6GP18545 87 aa12.69□□□□□ -0.38
CHRD-208ENST00000460627 LINC00310P59036 64 aa12.69□□□□□ -0.38
CHRD-208ENST00000460627 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
CHRD-208ENST00000460627 RBM3P98179 157 aaKnown RBP12.69□□□□□ -0.38
CHRD-208ENST00000460627 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
CHRD-208ENST00000460627 AGRNO00468 2067 aa12.68□□□□□ -0.38
CHRD-208ENST00000460627 MUC7Q8TAX7 377 aa12.68□□□□□ -0.38
CHRD-208ENST00000460627 IGLV4-69A0A075B6H9 119 aa12.68□□□□□ -0.38
CHRD-208ENST00000460627 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
CHRD-208ENST00000460627 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
CHRD-208ENST00000460627 NUPR2A6NF83 97 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 A8MZ25 164 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 LINC00242Q5T6M2 205 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 CSDC2Q9Y534 153 aaKnown RBP12.66□□□□□ -0.38
CHRD-208ENST00000460627 Q6ZTC4 211 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 Q8IZM0 81 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 HIGD2AQ9BW72 106 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
CHRD-208ENST00000460627 NREPQ16612 68 aa12.65□□□□□ -0.38
CHRD-208ENST00000460627 BRCA2P51587 3418 aa12.65□□□□□ -0.38
CHRD-208ENST00000460627 TCL1BO95988 128 aa12.64□□□□□ -0.39
CHRD-208ENST00000460627 NDUFB1O75438 58 aa12.63□□□□□ -0.39
CHRD-208ENST00000460627 C4orf48Q5BLP8 95 aa12.63□□□□□ -0.39
CHRD-208ENST00000460627 COX17Q14061 63 aa12.62□□□□□ -0.39
CHRD-208ENST00000460627 COL27A1Q8IZC6 1860 aaPredicted RBP12.62□□□□□ -0.39
CHRD-208ENST00000460627 A0A087WZ39 114 aa12.61□□□□□ -0.39
CHRD-208ENST00000460627 FOXI1Q12951 378 aa12.61□□□□□ -0.39
CHRD-208ENST00000460627 LINC00526Q96FQ7 95 aa12.61□□□□□ -0.39
CHRD-208ENST00000460627 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
CHRD-208ENST00000460627 C9orf153Q5TBE3 101 aa12.61□□□□□ -0.39
CHRD-208ENST00000460627 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
CHRD-208ENST00000460627 C2orf91Q6ZV80 131 aa12.6□□□□□ -0.39
CHRD-208ENST00000460627 C6orf99Q4VX62 202 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 FAM19A5Q7Z5A7 132 aaPredicted RBP12.59□□□□□ -0.39
CHRD-208ENST00000460627 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 KIF25-AS1Q9Y6Z4 181 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 FAM19A4Q96LR4 140 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 TRANK1O15050 2925 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
CHRD-208ENST00000460627 M0R2N4 97 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 AMELXQ99217 191 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 M0R378 163 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 LY6G6CO95867 125 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 LINC00694P0DN24 101 aa12.58□□□□□ -0.4
CHRD-208ENST00000460627 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 A0A1B0GUV1 79 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 CYSRT1A8MQ03 144 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 SMIM1B2RUZ4 78 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 TRIAP1O43715 76 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 Q6ZSN1 163 aa12.57□□□□□ -0.4
CHRD-208ENST00000460627 C5orf42Q9H799 3197 aa12.56□□□□□ -0.4
CHRD-208ENST00000460627 TRAV23DV6A0A075B6W5 121 aa12.56□□□□□ -0.4
CHRD-208ENST00000460627 KRTAP24-1Q3LI83 254 aa12.56□□□□□ -0.4
CHRD-208ENST00000460627 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
CHRD-208ENST00000460627 A0A096LNJ9 63 aa12.55□□□□□ -0.4
CHRD-208ENST00000460627 NHLRC4P0CG21 123 aaPredicted RBP12.55□□□□□ -0.4
CHRD-208ENST00000460627 EGFEM1PQ0D2K5 195 aa12.55□□□□□ -0.4
CHRD-208ENST00000460627 G3V4G9 280 aa12.54□□□□□ -0.4
CHRD-208ENST00000460627 C7orf33Q8WU49 177 aa12.54□□□□□ -0.4
CHRD-208ENST00000460627 A0A096LNT2 108 aa12.53□□□□□ -0.4
CHRD-208ENST00000460627 NDUFS5O43920 106 aa12.53□□□□□ -0.4
CHRD-208ENST00000460627 C14orf132Q9NPU4 83 aa12.52□□□□□ -0.4
CHRD-208ENST00000460627 IGKV3D-7A0A0C4DH55 119 aa12.52□□□□□ -0.41
CHRD-208ENST00000460627 LINC00474Q9P2X8 69 aa12.52□□□□□ -0.41
CHRD-208ENST00000460627 LYPD5Q6UWN5 251 aa12.51□□□□□ -0.41
CHRD-208ENST00000460627 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
CHRD-208ENST00000460627 IGKV2-28A0A075B6P5 120 aa12.49□□□□□ -0.41
CHRD-208ENST00000460627 IGKV2D-28P01615 120 aa12.49□□□□□ -0.41
CHRD-208ENST00000460627 LINC00315P59091 139 aa12.48□□□□□ -0.41
CHRD-208ENST00000460627 COX6A2Q02221 97 aa12.48□□□□□ -0.41
CHRD-208ENST00000460627 HELZ2Q9BYK8 2649 aaKnown RBP12.48□□□□□ -0.41
CHRD-208ENST00000460627 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
CHRD-208ENST00000460627 ZNF292O60281 2723 aa12.47□□□□□ -0.41
CHRD-208ENST00000460627 LINC00643Q86TS7 51 aa12.47□□□□□ -0.41
CHRD-208ENST00000460627 LAMA2P24043 3122 aaKnown RBP12.47□□□□□ -0.41
CHRD-208ENST00000460627 F8WDY8 70 aa12.46□□□□□ -0.41
CHRD-208ENST00000460627 SLPIP03973 132 aa12.46□□□□□ -0.41
CHRD-208ENST00000460627 LINC01561Q8N1V8 128 aa12.46□□□□□ -0.41
CHRD-208ENST00000460627 WFDC10BQ8IUB3 73 aa12.46□□□□□ -0.42
CHRD-208ENST00000460627 SMIM11BQ8TCY0 68 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 MUC4Q99102 2169 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 A0A1B0GX51 115 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 LST1O00453 97 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 Q6ZQY7 126 aa12.45□□□□□ -0.42
CHRD-208ENST00000460627 ATOX1O00244 68 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms