RNA–Protein interactions for RNA: ENST00000458450.1

LINC01399-202, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

BASIC

Gene LINC01399, Length 244 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-202ENST00000458450 AKAP13Q12802 2813 aa-0.32□□□□□ -2.46
LINC01399-202ENST00000458450 KIAA0556O60303 1618 aa-0.32□□□□□ -2.46
LINC01399-202ENST00000458450 SMG6Q86US8 1419 aaKnown RBP-0.32□□□□□ -2.46
LINC01399-202ENST00000458450 NSD3Q9BZ95 1437 aa-0.32□□□□□ -2.46
LINC01399-202ENST00000458450 CHD1O14646 1710 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 HERC1Q15751 4861 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 WDR7Q9Y4E6 1490 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 TRBV7-3A0A075B6L6 115 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 PIGBOS1A0A0B4J2F0 54 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 IGLC7A0M8Q6 106 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 F8VRH5 84 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 SPINK4O60575 86 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 TNFP01375 233 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 SPRR1BP22528 89 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 TPPP2P59282 170 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 SELENOWP63302 87 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 KRTAP20-2Q3LI61 65 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 MEIG1Q5JSS6 88 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 TSLPQ969D9 159 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 ARL11Q969Q4 196 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 MGST2Q99735 147 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 SPANXDQ9BXN6 97 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 NAA60Q9H7X0 242 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 DIP2CQ9Y2E4 1556 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
LINC01399-202ENST00000458450 NEBP20929 6669 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 A2ML1A8K2U0 1454 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 GAPVD1Q14C86 1478 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 LOC100130705A0A1B0GUX0 176 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 MIF4GDA9UHW6 222 aaKnown RBP-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 K7EP13 123 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 M0R2T5 61 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 HMGN4O00479 90 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 GNG7O60262 68 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 TACC2O95359 2948 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 PDCD11Q14690 1871 aaKnown RBP-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 XRN1Q8IZH2 1706 aaKnown RBP-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 SPRR4Q96PI1 79 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 DYNLRB1Q9NP97 96 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 FMN2Q9NZ56 1722 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 EPG5Q9HCE0 2579 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 VPS13BQ7Z7G8 4022 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 FAT3Q8TDW7 4589 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 PAPPA2Q9BXP8 1791 aa-0.34□□□□□ -2.46
LINC01399-202ENST00000458450 MAGI1Q96QZ7 1491 aaPredicted RBP-0.35□□□□□ -2.46
LINC01399-202ENST00000458450 SHANK2Q9UPX8 1470 aa-0.35□□□□□ -2.46
LINC01399-202ENST00000458450 HIVEP1P15822 2718 aa-0.35□□□□□ -2.46
LINC01399-202ENST00000458450 KALRNO60229 2985 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 NBASA2RRP1 2371 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 APOC3P02656 99 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 COX6B1P14854 86 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 FGF7P21781 194 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 Q56UQ5 140 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 COMMD6Q7Z4G1 85 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 MYOZ3Q8TDC0 251 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 PPP3R2Q96LZ3 170 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 LINC00474Q9P2X8 69 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 STARD9Q9P2P6 4700 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 EHBP1L1Q8N3D4 1523 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 TNRC18O15417 2968 aaPredicted RBP-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 PCLOQ9Y6V0 5065 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 A0A0G2JMZ2 1700 aa-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
LINC01399-202ENST00000458450 COL4A6Q14031 1691 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 NAIPQ13075 1403 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 PKHD1L1Q86WI1 4243 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 FAM25AB3EWG3 89 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 FAM25CB3EWG5 89 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 FAM25GB3EWG6 89 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 SFT2D2O95562 160 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 APOC2P02655 101 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 S100A12P80511 92 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 CATR1Q13166 79 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 CCDC58Q4VC31 144 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 C5orf38Q86SI9 138 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 CDC42SE2Q9NRR3 84 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 TOP2BQ02880 1626 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 VPS13DQ5THJ4 4388 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 SPHKAPQ2M3C7 1700 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 ABCA3Q99758 1704 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 KIAA1551Q9HCM1 1747 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 MRC2Q9UBG0 1479 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 DNAH9Q9NYC9 4486 aa-0.36□□□□□ -2.47
LINC01399-202ENST00000458450 TOPAZ1Q8N9V7 1692 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 ITPR3Q14573 2671 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 KNL1Q8NG31 2342 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 CC2D2AQ9P2K1 1620 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 LOC285095A0A1B0GVY8 99 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 OOSP1A8MZH6 123 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 SYS1-DBNDD2H3BUS1 97 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 SSSCA1O60232 199 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 C10orf113Q5VZT2 155 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 MRPL54Q6P161 138 aaKnown RBP-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 C8orf59Q8N0T1 100 aaPredicted RBP-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 DEFB105AQ8NG35 78 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 MYOM2P54296 1465 aa-0.37□□□□□ -2.47
LINC01399-202ENST00000458450 IQSEC2Q5JU85 1478 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms