RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 SS18Q15532 418 aa13.27□□□□□ -0.29
TMEM56-203ENST00000456991 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
TMEM56-203ENST00000456991 CD164L2Q6UWJ8 174 aa13.26□□□□□ -0.29
TMEM56-203ENST00000456991 SVBPQ8N300 66 aa13.26□□□□□ -0.29
TMEM56-203ENST00000456991 KIR2DL4Q99706 377 aa13.26□□□□□ -0.29
TMEM56-203ENST00000456991 TRAV9-1A0A075B6T8 112 aa13.25□□□□□ -0.29
TMEM56-203ENST00000456991 SNAPINO95295 136 aa13.25□□□□□ -0.29
TMEM56-203ENST00000456991 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
TMEM56-203ENST00000456991 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
TMEM56-203ENST00000456991 TCAPO15273 167 aa13.24□□□□□ -0.29
TMEM56-203ENST00000456991 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
TMEM56-203ENST00000456991 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
TMEM56-203ENST00000456991 GAGE2BQ13066 116 aa13.23□□□□□ -0.29
TMEM56-203ENST00000456991 CDC42SE2Q9NRR3 84 aa13.23□□□□□ -0.29
TMEM56-203ENST00000456991 RPL32P62910 135 aaKnown RBP13.22□□□□□ -0.29
TMEM56-203ENST00000456991 TGIF2-C20orf24A0A0A6YYL0 155 aa13.21□□□□□ -0.29
TMEM56-203ENST00000456991 MRPL52Q86TS9 123 aaKnown RBP13.21□□□□□ -0.29
TMEM56-203ENST00000456991 ZNF664Q8N3J9 261 aa13.21□□□□□ -0.29
TMEM56-203ENST00000456991 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
TMEM56-203ENST00000456991 A0A1W2PNN7 141 aa13.19□□□□□ -0.3
TMEM56-203ENST00000456991 MALP21145 153 aa13.19□□□□□ -0.3
TMEM56-203ENST00000456991 GNB1LQ9BYB4 327 aa13.19□□□□□ -0.3
TMEM56-203ENST00000456991 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
TMEM56-203ENST00000456991 C1orf196B1AJZ1 125 aa13.18□□□□□ -0.3
TMEM56-203ENST00000456991 RPL39P62891 51 aaKnown RBP13.18□□□□□ -0.3
TMEM56-203ENST00000456991 COX7A2LO14548 114 aa13.17□□□□□ -0.3
TMEM56-203ENST00000456991 MT-ND6P03923 174 aa13.17□□□□□ -0.3
TMEM56-203ENST00000456991 RAB5AP20339 215 aa13.17□□□□□ -0.3
TMEM56-203ENST00000456991 LAMTOR2Q9Y2Q5 125 aa13.17□□□□□ -0.3
TMEM56-203ENST00000456991 PRSS47A8MTI9 375 aa13.16□□□□□ -0.3
TMEM56-203ENST00000456991 APOMO95445 188 aa13.16□□□□□ -0.3
TMEM56-203ENST00000456991 FABP9Q0Z7S8 132 aa13.16□□□□□ -0.3
TMEM56-203ENST00000456991 RNASE13Q5GAN3 156 aaKnown RBP13.16□□□□□ -0.3
TMEM56-203ENST00000456991 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
TMEM56-203ENST00000456991 PSORS1C2Q9UIG4 136 aa13.16□□□□□ -0.3
TMEM56-203ENST00000456991 UBE2D4Q9Y2X8 147 aa13.16□□□□□ -0.3
TMEM56-203ENST00000456991 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
TMEM56-203ENST00000456991 Q8N8P6 123 aa13.15□□□□□ -0.3
TMEM56-203ENST00000456991 CAMK2N2Q96S95 79 aa13.15□□□□□ -0.3
TMEM56-203ENST00000456991 IFI27P40305 119 aaPredicted RBP13.14□□□□□ -0.31
TMEM56-203ENST00000456991 TMEM18Q96B42 140 aa13.14□□□□□ -0.31
TMEM56-203ENST00000456991 LPAP08519 4548 aa13.13□□□□□ -0.31
TMEM56-203ENST00000456991 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
TMEM56-203ENST00000456991 COX19Q49B96 90 aa13.13□□□□□ -0.31
TMEM56-203ENST00000456991 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
TMEM56-203ENST00000456991 OPRPNQ99935 248 aaPredicted RBP13.13□□□□□ -0.31
TMEM56-203ENST00000456991 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
TMEM56-203ENST00000456991 C1orf137Q5JT78 98 aa13.12□□□□□ -0.31
TMEM56-203ENST00000456991 ALKBH7Q9BT30 221 aaPredicted RBP13.12□□□□□ -0.31
TMEM56-203ENST00000456991 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
TMEM56-203ENST00000456991 TRAPPC1Q9Y5R8 145 aa13.12□□□□□ -0.31
TMEM56-203ENST00000456991 Q6ZUT4 128 aa13.11□□□□□ -0.31
TMEM56-203ENST00000456991 CBLN2Q8IUK8 224 aa13.11□□□□□ -0.31
TMEM56-203ENST00000456991 TRAV13-1A0A0B4J241 112 aa13.1□□□□□ -0.31
TMEM56-203ENST00000456991 RPL18AQ02543 176 aaKnown RBP13.1□□□□□ -0.31
TMEM56-203ENST00000456991 PHF5AQ7RTV0 110 aaKnown RBP13.09□□□□□ -0.31
TMEM56-203ENST00000456991 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
TMEM56-203ENST00000456991 YPEL4Q96NS1 127 aa13.09□□□□□ -0.31
TMEM56-203ENST00000456991 TIMM21Q9BVV7 248 aa13.09□□□□□ -0.31
TMEM56-203ENST00000456991 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
TMEM56-203ENST00000456991 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
TMEM56-203ENST00000456991 DIRC1Q969H9 104 aa13.08□□□□□ -0.32
TMEM56-203ENST00000456991 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
TMEM56-203ENST00000456991 SMCO4Q9NRQ5 59 aa13.07□□□□□ -0.32
TMEM56-203ENST00000456991 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
TMEM56-203ENST00000456991 ORMDL2Q53FV1 153 aa13.06□□□□□ -0.32
TMEM56-203ENST00000456991 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
TMEM56-203ENST00000456991 IGLV7-43P04211 117 aa13.05□□□□□ -0.32
TMEM56-203ENST00000456991 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
TMEM56-203ENST00000456991 PRR26Q8N8Z3 221 aa13.05□□□□□ -0.32
TMEM56-203ENST00000456991 A0A087WZ39 114 aa13.03□□□□□ -0.32
TMEM56-203ENST00000456991 ZC2HC1BQ5TFG8 222 aa13.03□□□□□ -0.32
TMEM56-203ENST00000456991 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
TMEM56-203ENST00000456991 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
TMEM56-203ENST00000456991 F8WDY8 70 aa13.02□□□□□ -0.33
TMEM56-203ENST00000456991 MRPS36P82909 103 aaKnown RBP13.02□□□□□ -0.33
TMEM56-203ENST00000456991 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
TMEM56-203ENST00000456991 IGLV4-3A0A075B6K6 122 aa13.01□□□□□ -0.33
TMEM56-203ENST00000456991 K7EMI3 77 aa13.01□□□□□ -0.33
TMEM56-203ENST00000456991 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
TMEM56-203ENST00000456991 PYGO1Q9Y3Y4 419 aa13.01□□□□□ -0.33
TMEM56-203ENST00000456991 IFITM10A6NMD0 228 aa13□□□□□ -0.33
TMEM56-203ENST00000456991 H0Y9J4 135 aa13□□□□□ -0.33
TMEM56-203ENST00000456991 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
TMEM56-203ENST00000456991 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
TMEM56-203ENST00000456991 NDUFA1O15239 70 aa12.98□□□□□ -0.33
TMEM56-203ENST00000456991 TMEM141Q96I45 108 aa12.98□□□□□ -0.33
TMEM56-203ENST00000456991 IGLV1-50A0A075B6I6 118 aa12.97□□□□□ -0.33
TMEM56-203ENST00000456991 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
TMEM56-203ENST00000456991 SCO1O75880 301 aa12.97□□□□□ -0.33
TMEM56-203ENST00000456991 TOMM6Q96B49 74 aa12.97□□□□□ -0.33
TMEM56-203ENST00000456991 MUC2Q02817 5179 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 FAM168BA1KXE4 195 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 LINC01546A6NGU7 62 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 TLX1NBP0CAT3 122 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 URB1-AS1Q96HZ7 61 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 VCX2Q9H322 139 aa12.96□□□□□ -0.33
TMEM56-203ENST00000456991 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
TMEM56-203ENST00000456991 G0S2P27469 103 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms