RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 C9JAW5 83 aa7.59□□□□□ -1.19
GTF3C2-206ENST00000454704 Q6ZSN1 163 aa7.59□□□□□ -1.19
GTF3C2-206ENST00000454704 DEFB104AQ8WTQ1 72 aa7.59□□□□□ -1.19
GTF3C2-206ENST00000454704 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
GTF3C2-206ENST00000454704 ICOSQ9Y6W8 199 aa7.59□□□□□ -1.19
GTF3C2-206ENST00000454704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 TRAV8-3A0A0A6YYJ7 113 aa7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 IGKV2-29A2NJV5 120 aaPredicted RBP7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 CCL24O00175 119 aa7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 EIF4EBP3O60516 100 aaPredicted RBP7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 CARD19Q96LW7 228 aa7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
GTF3C2-206ENST00000454704 PRSS2P07478 247 aa7.57□□□□□ -1.2
GTF3C2-206ENST00000454704 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
GTF3C2-206ENST00000454704 INSL3P51460 131 aa7.57□□□□□ -1.2
GTF3C2-206ENST00000454704 MRPL23Q16540 153 aaKnown RBP7.57□□□□□ -1.2
GTF3C2-206ENST00000454704 RYR3Q15413 4870 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 TRGV1A0A0A0MS02 117 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 TRIAP1O43715 76 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 KPRPQ5T749 579 aaPredicted RBP7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 CEMP1Q6PRD7 247 aaPredicted RBP7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 C11orf44Q8N8P7 122 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 XCL2Q9UBD3 114 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 CDKN2A-AS1Q9UH64 79 aa7.56□□□□□ -1.2
GTF3C2-206ENST00000454704 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 TRBV6-4A0A1B0GX49 114 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 LST1O00453 97 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 PF4P02776 101 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 LINC00242Q5T6M2 205 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
GTF3C2-206ENST00000454704 ADAMTSL4-AS1Q5T5F5 129 aa7.54□□□□□ -1.2
GTF3C2-206ENST00000454704 UBE2WQ96B02 151 aa7.54□□□□□ -1.2
GTF3C2-206ENST00000454704 TMEM243Q9BU79 118 aa7.54□□□□□ -1.2
GTF3C2-206ENST00000454704 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
GTF3C2-206ENST00000454704 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 SMIM1B2RUZ4 78 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 UBE2L6O14933 153 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 FAM222AQ5U5X8 452 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 Q6Q795 121 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
GTF3C2-206ENST00000454704 ADARB2-AS1A8MUL3 147 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 H7C2G1 150 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 IGLV1-51P01701 117 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 RNASE13Q5GAN3 156 aaKnown RBP7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 DEFB121Q5J5C9 76 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 LINC00308Q8TCZ7 52 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 Q9H8V8 135 aa7.52□□□□□ -1.2
GTF3C2-206ENST00000454704 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
GTF3C2-206ENST00000454704 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
GTF3C2-206ENST00000454704 NTN5Q8WTR8 489 aaPredicted RBP7.52□□□□□ -1.21
GTF3C2-206ENST00000454704 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
GTF3C2-206ENST00000454704 SORL1Q92673 2214 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 COX7A2LO14548 114 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 XGP55808 180 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 CKS1BP61024 79 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 Q6ZTI0 123 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 Q9UF83 564 aa7.51□□□□□ -1.21
GTF3C2-206ENST00000454704 TRAV26-1A0A087WT03 109 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 TRAV8-4A0A0B4J246 113 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 F5H768 121 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 PRM2P04554 102 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 ACYP1P07311 99 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 COX6A2Q02221 97 aa7.5□□□□□ -1.21
GTF3C2-206ENST00000454704 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 GAGE12JA6NER3 117 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 TRACP01848 142 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 GAGE4Q13068 117 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 GAGE5Q13069 117 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 KIR2DL5BQ8NHK3 375 aa7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 CITED2Q99967 270 aaPredicted RBP7.49□□□□□ -1.21
GTF3C2-206ENST00000454704 TRGV2A0A075B6R0 118 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 SNCGO76070 127 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 MT-ATP8P03928 68 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 LINC01561Q8N1V8 128 aa7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
GTF3C2-206ENST00000454704 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
GTF3C2-206ENST00000454704 TRGV4A0A0C4DH28 118 aa7.47□□□□□ -1.21
GTF3C2-206ENST00000454704 CSNK1G2-AS1Q8NCQ2 148 aa7.47□□□□□ -1.21
GTF3C2-206ENST00000454704 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
GTF3C2-206ENST00000454704 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
GTF3C2-206ENST00000454704 TRAV13-1A0A0B4J241 112 aa7.46□□□□□ -1.21
GTF3C2-206ENST00000454704 SMIM9A6NGZ8 99 aa7.46□□□□□ -1.21
GTF3C2-206ENST00000454704 A8MZ25 164 aa7.46□□□□□ -1.21
GTF3C2-206ENST00000454704 GIG44P09565 113 aaPredicted RBP7.46□□□□□ -1.21
GTF3C2-206ENST00000454704 COX7B2Q8TF08 81 aa7.46□□□□□ -1.21
GTF3C2-206ENST00000454704 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
GTF3C2-206ENST00000454704 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
GTF3C2-206ENST00000454704 LINC00612Q8N6U2 182 aa7.45□□□□□ -1.22
GTF3C2-206ENST00000454704 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
GTF3C2-206ENST00000454704 GAGE7O76087 117 aa7.44□□□□□ -1.22
GTF3C2-206ENST00000454704 GAGE12FP0CL80 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms