RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FAM19A5Q7Z5A7 132 aaPredicted RBP14.4□□□□□ -0.1
LYSMD2-202ENST00000454181 IGHV3OR16-9A0A0B4J2B5 98 aa14.39□□□□□ -0.11
LYSMD2-202ENST00000454181 FAM168BA1KXE4 195 aa14.39□□□□□ -0.11
LYSMD2-202ENST00000454181 GAGE2EQ4V326 116 aa14.39□□□□□ -0.11
LYSMD2-202ENST00000454181 SPANXA1Q9NS26 97 aa14.39□□□□□ -0.11
LYSMD2-202ENST00000454181 GAGE2DQ9UEU5 116 aa14.39□□□□□ -0.11
LYSMD2-202ENST00000454181 IGLV1-50A0A075B6I6 118 aa14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 IFITM10A6NMD0 228 aa14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 SRP19P09132 144 aaKnown RBP14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 TLX1NBP0CAT3 122 aa14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 HBBP68871 147 aa14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 UNQ6190/PRO20217Q6UXQ8 127 aa14.38□□□□□ -0.11
LYSMD2-202ENST00000454181 TRBV24-1A0A075B6N3 115 aa14.37□□□□□ -0.11
LYSMD2-202ENST00000454181 RPL32P62910 135 aaKnown RBP14.37□□□□□ -0.11
LYSMD2-202ENST00000454181 UBE2BP63146 152 aa14.37□□□□□ -0.11
LYSMD2-202ENST00000454181 C10orf25Q5T742 122 aa14.37□□□□□ -0.11
LYSMD2-202ENST00000454181 LPAP08519 4548 aa14.36□□□□□ -0.11
LYSMD2-202ENST00000454181 TGIF2-C20orf24A0A0A6YYL0 155 aa14.36□□□□□ -0.11
LYSMD2-202ENST00000454181 TNFRSF6BO95407 300 aa14.36□□□□□ -0.11
LYSMD2-202ENST00000454181 UBE2D1P51668 147 aa14.36□□□□□ -0.11
LYSMD2-202ENST00000454181 A0A1B0GW15 77 aa14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 MRPS36P82909 103 aaKnown RBP14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 FAM74A3Q4VXF1 159 aa14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 AKAP14Q86UN6 197 aa14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 SMIM2Q9BVW6 85 aa14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 C6orf48Q9UBA6 75 aa14.35□□□□□ -0.11
LYSMD2-202ENST00000454181 KRTAP11-1Q8IUC1 163 aa14.34□□□□□ -0.11
LYSMD2-202ENST00000454181 SMDT1Q9H4I9 107 aa14.34□□□□□ -0.11
LYSMD2-202ENST00000454181 ADIRFQ15847 76 aa14.33□□□□□ -0.12
LYSMD2-202ENST00000454181 M0QXV9 152 aa14.32□□□□□ -0.12
LYSMD2-202ENST00000454181 RPL23P62829 140 aaKnown RBP14.32□□□□□ -0.12
LYSMD2-202ENST00000454181 SMIM27A0A1W2PRY6 76 aa14.31□□□□□ -0.12
LYSMD2-202ENST00000454181 F8W036 122 aa14.31□□□□□ -0.12
LYSMD2-202ENST00000454181 S100A8P05109 93 aa14.31□□□□□ -0.12
LYSMD2-202ENST00000454181 PRR4Q16378 134 aa14.31□□□□□ -0.12
LYSMD2-202ENST00000454181 FAM104AQ969W3 186 aa14.31□□□□□ -0.12
LYSMD2-202ENST00000454181 D6R8Y8 96 aa14.3□□□□□ -0.12
LYSMD2-202ENST00000454181 RAB5AP20339 215 aa14.3□□□□□ -0.12
LYSMD2-202ENST00000454181 IFI27P40305 119 aaPredicted RBP14.3□□□□□ -0.12
LYSMD2-202ENST00000454181 RPL13AP40429 203 aaKnown RBP14.3□□□□□ -0.12
LYSMD2-202ENST00000454181 PACRGQ96M98 296 aaPredicted RBP14.29□□□□□ -0.12
LYSMD2-202ENST00000454181 TRBV30A0A0K0K1B3 111 aa14.28□□□□□ -0.12
LYSMD2-202ENST00000454181 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
LYSMD2-202ENST00000454181 NPYP01303 97 aa14.27□□□□□ -0.13
LYSMD2-202ENST00000454181 PPBPP02775 128 aa14.27□□□□□ -0.13
LYSMD2-202ENST00000454181 KRTAP1-4P0C5Y4 121 aa14.27□□□□□ -0.13
LYSMD2-202ENST00000454181 MRPL54Q6P161 138 aaKnown RBP14.27□□□□□ -0.13
LYSMD2-202ENST00000454181 NDUFC2-KCTD14E9PQ53 114 aa14.26□□□□□ -0.13
LYSMD2-202ENST00000454181 KIAA0087Q14695 138 aa14.26□□□□□ -0.13
LYSMD2-202ENST00000454181 LINC00242Q5T6M2 205 aa14.24□□□□□ -0.13
LYSMD2-202ENST00000454181 C2orf82Q6UX34 121 aa14.24□□□□□ -0.13
LYSMD2-202ENST00000454181 KRTAP7-1Q8IUC3 87 aa14.24□□□□□ -0.13
LYSMD2-202ENST00000454181 PYGO1Q9Y3Y4 419 aa14.23□□□□□ -0.13
LYSMD2-202ENST00000454181 ORMDL3Q8N138 153 aa14.22□□□□□ -0.13
LYSMD2-202ENST00000454181 TMEM141Q96I45 108 aa14.22□□□□□ -0.13
LYSMD2-202ENST00000454181 CARHSP1Q9Y2V2 147 aaKnown RBP14.22□□□□□ -0.13
LYSMD2-202ENST00000454181 hCG_2014768A0A024R1R8 64 aa14.21□□□□□ -0.13
LYSMD2-202ENST00000454181 PRSS2P07478 247 aa14.21□□□□□ -0.13
LYSMD2-202ENST00000454181 C9orf129Q5T035 196 aaKnown RBP14.21□□□□□ -0.13
LYSMD2-202ENST00000454181 C2orf88Q9BSF0 95 aa14.21□□□□□ -0.13
LYSMD2-202ENST00000454181 IGLV4-3A0A075B6K6 122 aa14.2□□□□□ -0.14
LYSMD2-202ENST00000454181 TEX43Q6ZNM6 134 aa14.2□□□□□ -0.14
LYSMD2-202ENST00000454181 TMEM136Q6ZRR5 245 aa14.2□□□□□ -0.14
LYSMD2-202ENST00000454181 A0A0U1RQV1 116 aa14.19□□□□□ -0.14
LYSMD2-202ENST00000454181 ZNF861PO60384 105 aa14.19□□□□□ -0.14
LYSMD2-202ENST00000454181 PEA15Q15121 130 aa14.19□□□□□ -0.14
LYSMD2-202ENST00000454181 LINC01561Q8N1V8 128 aa14.19□□□□□ -0.14
LYSMD2-202ENST00000454181 PRELID3AQ96N28 172 aa14.19□□□□□ -0.14
LYSMD2-202ENST00000454181 A0A1B0GXF2 115 aa14.18□□□□□ -0.14
LYSMD2-202ENST00000454181 CKS1BP61024 79 aa14.18□□□□□ -0.14
LYSMD2-202ENST00000454181 Q6ZN92 141 aa14.18□□□□□ -0.14
LYSMD2-202ENST00000454181 TOMM7Q9P0U1 55 aa14.17□□□□□ -0.14
LYSMD2-202ENST00000454181 C9JQL5 133 aa14.16□□□□□ -0.14
LYSMD2-202ENST00000454181 LBHQ53QV2 105 aaPredicted RBP14.16□□□□□ -0.14
LYSMD2-202ENST00000454181 LOC389332A0A1B0GUA5 103 aa14.15□□□□□ -0.14
LYSMD2-202ENST00000454181 NUPR1O60356 82 aa14.15□□□□□ -0.14
LYSMD2-202ENST00000454181 C6orf226Q5I0X4 101 aa14.15□□□□□ -0.14
LYSMD2-202ENST00000454181 TSPAN13O95857 204 aa14.14□□□□□ -0.15
LYSMD2-202ENST00000454181 LINC00469Q8N7U9 141 aa14.14□□□□□ -0.15
LYSMD2-202ENST00000454181 VCX2Q9H322 139 aa14.14□□□□□ -0.15
LYSMD2-202ENST00000454181 C22orf24Q9Y442 160 aa14.14□□□□□ -0.15
LYSMD2-202ENST00000454181 ATP5L2Q7Z4Y8 100 aa14.13□□□□□ -0.15
LYSMD2-202ENST00000454181 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
LYSMD2-202ENST00000454181 CYSLTR1Q9Y271 337 aa14.13□□□□□ -0.15
LYSMD2-202ENST00000454181 SRSF3P84103 164 aaKnown RBP14.11□□□□□ -0.15
LYSMD2-202ENST00000454181 ALKBH7Q9BT30 221 aaPredicted RBP14.11□□□□□ -0.15
LYSMD2-202ENST00000454181 CTDSP1Q9GZU7 261 aa14.11□□□□□ -0.15
LYSMD2-202ENST00000454181 XAGE1AQ9HD64 81 aa14.11□□□□□ -0.15
LYSMD2-202ENST00000454181 LAMTOR2Q9Y2Q5 125 aa14.11□□□□□ -0.15
LYSMD2-202ENST00000454181 RPL28P46779 137 aaKnown RBP14.09□□□□□ -0.15
LYSMD2-202ENST00000454181 ZC2HC1BQ5TFG8 222 aa14.09□□□□□ -0.15
LYSMD2-202ENST00000454181 C2orf66Q6UXQ4 117 aa14.09□□□□□ -0.15
LYSMD2-202ENST00000454181 Q8IZM0 81 aa14.09□□□□□ -0.15
LYSMD2-202ENST00000454181 PRSS47A8MTI9 375 aa14.08□□□□□ -0.16
LYSMD2-202ENST00000454181 Q8N8P6 123 aa14.07□□□□□ -0.16
LYSMD2-202ENST00000454181 AMELXQ99217 191 aa14.07□□□□□ -0.16
LYSMD2-202ENST00000454181 ORMDL2Q53FV1 153 aa14.06□□□□□ -0.16
LYSMD2-202ENST00000454181 MUC2Q02817 5179 aa14.05□□□□□ -0.16
LYSMD2-202ENST00000454181 CRYGAP11844 174 aa14.05□□□□□ -0.16
LYSMD2-202ENST00000454181 SEC11AP67812 179 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms