RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.36
MECP2-205ENST00000453960 FN1P02751 2386 aaKnown RBP12.77□□□□□ -0.37
MECP2-205ENST00000453960 CITED1Q99966 193 aa12.76□□□□□ -0.37
MECP2-205ENST00000453960 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
MECP2-205ENST00000453960 UBE2L6O14933 153 aa12.76□□□□□ -0.37
MECP2-205ENST00000453960 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
MECP2-205ENST00000453960 VWFP04275 2813 aa12.75□□□□□ -0.37
MECP2-205ENST00000453960 PSMB2P49721 201 aa12.75□□□□□ -0.37
MECP2-205ENST00000453960 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 M0QXV9 152 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 LINC01600Q96MT4 127 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 WIPF1O43516 503 aa12.74□□□□□ -0.37
MECP2-205ENST00000453960 SH2D6Q7Z4S9 175 aa12.73□□□□□ -0.37
MECP2-205ENST00000453960 Q9H8V8 135 aa12.73□□□□□ -0.37
MECP2-205ENST00000453960 DNHD1Q96M86 4753 aa12.73□□□□□ -0.37
MECP2-205ENST00000453960 LYRM9A8MSI8 78 aa12.72□□□□□ -0.37
MECP2-205ENST00000453960 PRSS2P07478 247 aa12.71□□□□□ -0.37
MECP2-205ENST00000453960 HERV-K104P63124 156 aa12.71□□□□□ -0.37
MECP2-205ENST00000453960 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
MECP2-205ENST00000453960 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
MECP2-205ENST00000453960 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
MECP2-205ENST00000453960 J3QR89 54 aa12.7□□□□□ -0.38
MECP2-205ENST00000453960 KRTAP21-3Q3LHN1 58 aa12.7□□□□□ -0.38
MECP2-205ENST00000453960 MTURNQ8N3F0 131 aa12.7□□□□□ -0.38
MECP2-205ENST00000453960 IGLV4-60A0A075B6I1 120 aa12.69□□□□□ -0.38
MECP2-205ENST00000453960 GAGE6Q13070 117 aa12.69□□□□□ -0.38
MECP2-205ENST00000453960 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 PRO0255Q9UI72 69 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 A0A1B0GUV1 79 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 SCGB1C2P0DMR2 95 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 PCP4P48539 62 aa12.68□□□□□ -0.38
MECP2-205ENST00000453960 APOC4P55056 127 aa12.67□□□□□ -0.38
MECP2-205ENST00000453960 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
MECP2-205ENST00000453960 TRIAP1O43715 76 aa12.66□□□□□ -0.38
MECP2-205ENST00000453960 FOXI1Q12951 378 aa12.66□□□□□ -0.38
MECP2-205ENST00000453960 GYPEP15421 78 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 TEN1Q86WV5 123 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 CHCHD5Q9BSY4 110 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 ICOSQ9Y6W8 199 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 FAM222AQ5U5X8 452 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.38
MECP2-205ENST00000453960 A0A087WZ39 114 aa12.64□□□□□ -0.39
MECP2-205ENST00000453960 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
MECP2-205ENST00000453960 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
MECP2-205ENST00000453960 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
MECP2-205ENST00000453960 DAND5Q8N907 189 aa12.63□□□□□ -0.39
MECP2-205ENST00000453960 Q1RN00 199 aa12.62□□□□□ -0.39
MECP2-205ENST00000453960 COX7B2Q8TF08 81 aa12.62□□□□□ -0.39
MECP2-205ENST00000453960 H7C2G1 150 aa12.62□□□□□ -0.39
MECP2-205ENST00000453960 Q8NAQ8 132 aa12.62□□□□□ -0.39
MECP2-205ENST00000453960 PPDPFLQ8WWR9 84 aa12.62□□□□□ -0.39
MECP2-205ENST00000453960 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 SLC25A20O43772 301 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 MIFP14174 115 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 NPC2P61916 151 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 DEFB135Q30KP9 77 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 LINC01620Q4KN68 170 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 CARD19Q96LW7 228 aa12.61□□□□□ -0.39
MECP2-205ENST00000453960 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
MECP2-205ENST00000453960 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
MECP2-205ENST00000453960 TRAV26-1A0A087WT03 109 aa12.59□□□□□ -0.39
MECP2-205ENST00000453960 PAX4O43316 350 aa12.59□□□□□ -0.39
MECP2-205ENST00000453960 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 C9JAW5 83 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 COX6CP09669 75 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 MEIG1Q5JSS6 88 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 SHISA2Q6UWI4 295 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 NBEAL2Q6ZNJ1 2754 aa12.58□□□□□ -0.4
MECP2-205ENST00000453960 TRBV10-2A0A0K0K1G8 114 aa12.57□□□□□ -0.4
MECP2-205ENST00000453960 ATRQ13535 2644 aa12.57□□□□□ -0.4
MECP2-205ENST00000453960 LST1O00453 97 aa12.57□□□□□ -0.4
MECP2-205ENST00000453960 ANKRD29Q8N6D5 301 aa12.57□□□□□ -0.4
MECP2-205ENST00000453960 TRRAPQ9Y4A5 3859 aa12.55□□□□□ -0.4
MECP2-205ENST00000453960 IBA57-AS1B1ANH7 110 aa12.55□□□□□ -0.4
MECP2-205ENST00000453960 ATP5G1P05496 136 aa12.54□□□□□ -0.4
MECP2-205ENST00000453960 DAD1P61803 113 aa12.54□□□□□ -0.4
MECP2-205ENST00000453960 CELA1Q9UNI1 258 aa12.54□□□□□ -0.4
MECP2-205ENST00000453960 H3BT86 120 aa12.53□□□□□ -0.4
MECP2-205ENST00000453960 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
MECP2-205ENST00000453960 SS18Q15532 418 aa12.53□□□□□ -0.4
MECP2-205ENST00000453960 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.41
MECP2-205ENST00000453960 A0A0U1RRA0 63 aa12.52□□□□□ -0.41
MECP2-205ENST00000453960 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.41
MECP2-205ENST00000453960 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 SIGMAR1Q99720 223 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 CDIP1Q9H305 208 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 COX7A2LO14548 114 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 DEFB4AO15263 64 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 Q8IZM0 81 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 MIR7-3HGQ8N6C7 128 aa12.51□□□□□ -0.41
MECP2-205ENST00000453960 TMEM262E9PQX1 116 aa12.5□□□□□ -0.41
MECP2-205ENST00000453960 SCGB1A1P11684 91 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms