RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 HIST1H2BBP33778 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BDP58876 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BCP62807 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST2H2BEQ16778 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 FAM19A2Q8N3H0 131 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 C15orf56Q8N910 161 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BHQ93079 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BNQ99877 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIST1H2BMQ99879 126 aa9.55□□□□□ -0.88
NCKIPSD-207ENST00000453349 DNAH2Q9P225 4427 aa9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 HERVK_113P63121 156 aa9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 COX6A2Q02221 97 aa9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 HIGD2BQ4VC39 106 aa9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
NCKIPSD-207ENST00000453349 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
NCKIPSD-207ENST00000453349 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-207ENST00000453349 A0A087WZ39 114 aa9.52□□□□□ -0.89
NCKIPSD-207ENST00000453349 GVQW2A0A096LPI5 108 aaPredicted RBP9.52□□□□□ -0.89
NCKIPSD-207ENST00000453349 A0A0J9YXV3 536 aa9.52□□□□□ -0.89
NCKIPSD-207ENST00000453349 NUPR1O60356 82 aa9.52□□□□□ -0.89
NCKIPSD-207ENST00000453349 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
NCKIPSD-207ENST00000453349 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
NCKIPSD-207ENST00000453349 LEPROTL1O95214 131 aa9.51□□□□□ -0.89
NCKIPSD-207ENST00000453349 LINC00310P59036 64 aa9.51□□□□□ -0.89
NCKIPSD-207ENST00000453349 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
NCKIPSD-207ENST00000453349 DNAH10Q8IVF4 4471 aa9.5□□□□□ -0.89
NCKIPSD-207ENST00000453349 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
NCKIPSD-207ENST00000453349 CNBPP62633 177 aaKnown RBP9.5□□□□□ -0.89
NCKIPSD-207ENST00000453349 OR10D4PQ8NGN7 298 aa9.5□□□□□ -0.89
NCKIPSD-207ENST00000453349 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
NCKIPSD-207ENST00000453349 C9orf163Q8N9P6 203 aa9.49□□□□□ -0.89
NCKIPSD-207ENST00000453349 ORAOV1Q8WV07 137 aa9.49□□□□□ -0.89
NCKIPSD-207ENST00000453349 HSPB8Q9UJY1 196 aa9.49□□□□□ -0.89
NCKIPSD-207ENST00000453349 DNAH17Q9UFH2 4485 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 SLPIP03973 132 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 FABP4P15090 132 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 KRTAP10-1P60331 282 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 LINC00469Q8N7U9 141 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 LINC00526Q96FQ7 95 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 PACRGQ96M98 296 aaPredicted RBP9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 CDKN2A-AS1Q9UH64 79 aa9.48□□□□□ -0.89
NCKIPSD-207ENST00000453349 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 F8WDY8 70 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 SPAG11BQ08648 103 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 CHTOPQ9Y3Y2 248 aaKnown RBP9.47□□□□□ -0.89
NCKIPSD-207ENST00000453349 H3BRM9 83 aa9.46□□□□□ -0.9
NCKIPSD-207ENST00000453349 PRSS2P07478 247 aa9.46□□□□□ -0.9
NCKIPSD-207ENST00000453349 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
NCKIPSD-207ENST00000453349 SYCNQ0VAF6 134 aa9.46□□□□□ -0.9
NCKIPSD-207ENST00000453349 H0Y8G0 127 aa9.45□□□□□ -0.9
NCKIPSD-207ENST00000453349 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
NCKIPSD-207ENST00000453349 CHAC1Q9BUX1 264 aa9.45□□□□□ -0.9
NCKIPSD-207ENST00000453349 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
NCKIPSD-207ENST00000453349 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 COA6Q5JTJ3 125 aaKnown RBP9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 MAP1LC3CQ9BXW4 147 aa9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 TOMM7Q9P0U1 55 aa9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 PKD1P98161 4303 aa9.44□□□□□ -0.9
NCKIPSD-207ENST00000453349 NDUFA1O15239 70 aa9.43□□□□□ -0.9
NCKIPSD-207ENST00000453349 CDK2AP2O75956 126 aa9.43□□□□□ -0.9
NCKIPSD-207ENST00000453349 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
NCKIPSD-207ENST00000453349 Q6ZRU5 148 aa9.43□□□□□ -0.9
NCKIPSD-207ENST00000453349 PKIGQ9Y2B9 76 aa9.43□□□□□ -0.9
NCKIPSD-207ENST00000453349 F8VRH5 84 aa9.42□□□□□ -0.9
NCKIPSD-207ENST00000453349 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
NCKIPSD-207ENST00000453349 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
NCKIPSD-207ENST00000453349 Q8IZM0 81 aa9.42□□□□□ -0.9
NCKIPSD-207ENST00000453349 C11orf86A6NJI1 115 aa9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 SPINK8P0C7L1 97 aa9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 CKS1BP61024 79 aa9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 EPPK1P58107 5090 aaKnown RBP9.41□□□□□ -0.9
NCKIPSD-207ENST00000453349 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
NCKIPSD-207ENST00000453349 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
NCKIPSD-207ENST00000453349 S100A6P06703 90 aa9.39□□□□□ -0.91
NCKIPSD-207ENST00000453349 ODF1Q14990 250 aa9.39□□□□□ -0.91
NCKIPSD-207ENST00000453349 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
NCKIPSD-207ENST00000453349 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
NCKIPSD-207ENST00000453349 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
NCKIPSD-207ENST00000453349 CXCL5P42830 114 aa9.38□□□□□ -0.91
NCKIPSD-207ENST00000453349 XGP55808 180 aa9.38□□□□□ -0.91
NCKIPSD-207ENST00000453349 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
NCKIPSD-207ENST00000453349 Q6ZSA8 131 aa9.38□□□□□ -0.91
NCKIPSD-207ENST00000453349 TRBV30A0A0K0K1B3 111 aa9.37□□□□□ -0.91
NCKIPSD-207ENST00000453349 PLNP26678 52 aa9.37□□□□□ -0.91
NCKIPSD-207ENST00000453349 C10orf25Q5T742 122 aa9.37□□□□□ -0.91
NCKIPSD-207ENST00000453349 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
NCKIPSD-207ENST00000453349 SYS1-DBNDD2H3BUS1 97 aa9.36□□□□□ -0.91
NCKIPSD-207ENST00000453349 DPM2O94777 84 aa9.36□□□□□ -0.91
NCKIPSD-207ENST00000453349 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms