RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NBL1P41271 181 aa13.2□□□□□ -0.3
PTPA-223ENST00000452489 ANKHD1Q8IWZ3 2542 aaKnown RBP13.2□□□□□ -0.3
PTPA-223ENST00000452489 CCL21O00585 134 aa13.19□□□□□ -0.3
PTPA-223ENST00000452489 BLCAPP62952 87 aa13.19□□□□□ -0.3
PTPA-223ENST00000452489 FAM19A3Q7Z5A8 133 aa13.19□□□□□ -0.3
PTPA-223ENST00000452489 USMG5Q96IX5 58 aa13.19□□□□□ -0.3
PTPA-223ENST00000452489 FAM229BQ4G0N7 80 aa13.18□□□□□ -0.3
PTPA-223ENST00000452489 MPLKIPQ8TAP9 179 aa13.18□□□□□ -0.3
PTPA-223ENST00000452489 JMJD7-PLA2G4BH0Y9G9 81 aa13.17□□□□□ -0.3
PTPA-223ENST00000452489 PAX4O43316 350 aa13.17□□□□□ -0.3
PTPA-223ENST00000452489 IGHV3-53P01767 116 aa13.17□□□□□ -0.3
PTPA-223ENST00000452489 RNASE1P07998 156 aaKnown RBP13.17□□□□□ -0.3
PTPA-223ENST00000452489 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
PTPA-223ENST00000452489 COX7B2Q8TF08 81 aa13.16□□□□□ -0.3
PTPA-223ENST00000452489 K7EQG2 157 aa13.15□□□□□ -0.3
PTPA-223ENST00000452489 LY6EQ16553 131 aa13.15□□□□□ -0.3
PTPA-223ENST00000452489 CFHR3Q02985 330 aa13.14□□□□□ -0.31
PTPA-223ENST00000452489 AKAP6Q13023 2319 aa13.14□□□□□ -0.31
PTPA-223ENST00000452489 GVINP1Q7Z2Y8 2422 aa13.14□□□□□ -0.31
PTPA-223ENST00000452489 K7EMT4 169 aa13.13□□□□□ -0.31
PTPA-223ENST00000452489 CDC42SE2Q9NRR3 84 aa13.13□□□□□ -0.31
PTPA-223ENST00000452489 SPTA1P02549 2419 aa13.13□□□□□ -0.31
PTPA-223ENST00000452489 BCE1O60756 84 aa13.12□□□□□ -0.31
PTPA-223ENST00000452489 LINC01547P58512 204 aaPredicted RBP13.12□□□□□ -0.31
PTPA-223ENST00000452489 M0R2N4 97 aa13.12□□□□□ -0.31
PTPA-223ENST00000452489 HAMPP81172 84 aa13.12□□□□□ -0.31
PTPA-223ENST00000452489 NTM-AS1Q6ZSK4 140 aa13.12□□□□□ -0.31
PTPA-223ENST00000452489 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
PTPA-223ENST00000452489 ANKRD11Q6UB99 2663 aaPredicted RBP13.12□□□□□ -0.31
PTPA-223ENST00000452489 LINC00167Q96N53 147 aa13.11□□□□□ -0.31
PTPA-223ENST00000452489 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
PTPA-223ENST00000452489 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
PTPA-223ENST00000452489 Q8N814 137 aa13.11□□□□□ -0.31
PTPA-223ENST00000452489 A0A096LNT2 108 aa13.09□□□□□ -0.31
PTPA-223ENST00000452489 TRBV6-4A0A1B0GX49 114 aa13.09□□□□□ -0.31
PTPA-223ENST00000452489 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
PTPA-223ENST00000452489 IGKV3OR2-268A0A0C4DH90 116 aa13.09□□□□□ -0.31
PTPA-223ENST00000452489 IL17DQ8TAD2 202 aa13.09□□□□□ -0.31
PTPA-223ENST00000452489 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
PTPA-223ENST00000452489 LY6G6DO95868 133 aa13.08□□□□□ -0.32
PTPA-223ENST00000452489 H3BUA1 57 aa13.08□□□□□ -0.32
PTPA-223ENST00000452489 DEFB124Q8NES8 71 aa13.07□□□□□ -0.32
PTPA-223ENST00000452489 C11orf71Q6IPW1 123 aa13.07□□□□□ -0.32
PTPA-223ENST00000452489 Q8NA96 180 aa13.07□□□□□ -0.32
PTPA-223ENST00000452489 ACACAQ13085 2346 aa13.07□□□□□ -0.32
PTPA-223ENST00000452489 MIFP14174 115 aa13.06□□□□□ -0.32
PTPA-223ENST00000452489 SPTAN1Q13813 2472 aaKnown RBP13.06□□□□□ -0.32
PTPA-223ENST00000452489 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
PTPA-223ENST00000452489 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■■■□□ 15.2
PTPA-223ENST00000452489 IGLV1-40P01703 118 aa13.05□□□□□ -0.32
PTPA-223ENST00000452489 PRR3P79522 188 aaKnown RBP13.05□□□□□ -0.32
PTPA-223ENST00000452489 Q6ZQT0 140 aa13.05□□□□□ -0.32
PTPA-223ENST00000452489 Q8N3U1 123 aa13.05□□□□□ -0.32
PTPA-223ENST00000452489 Q6ZVQ6 151 aa13.05□□□□□ -0.32
PTPA-223ENST00000452489 NDUFC1O43677 76 aa13.04□□□□□ -0.32
PTPA-223ENST00000452489 NANOS2P60321 138 aaKnown RBP13.04□□□□□ -0.32
PTPA-223ENST00000452489 BDP1A6H8Y1 2624 aa13.04□□□□□ -0.32
PTPA-223ENST00000452489 IBA57-AS1B1ANH7 110 aa13.04□□□□□ -0.32
PTPA-223ENST00000452489 K7EQD1 137 aa13.04□□□□□ -0.32
PTPA-223ENST00000452489 ATP5EP56381 51 aaPredicted RBP13.03□□□□□ -0.32
PTPA-223ENST00000452489 SCXQ7RTU7 201 aa13.02□□□□□ -0.33
PTPA-223ENST00000452489 C2CD3Q4AC94 2353 aa13.01□□□□□ -0.33
PTPA-223ENST00000452489 C10orf99Q6UWK7 81 aa13.01□□□□□ -0.33
PTPA-223ENST00000452489 VPS13CQ709C8 3753 aa13.01□□□□□ -0.33
PTPA-223ENST00000452489 DEFB131AP59861 70 aa13□□□□□ -0.33
PTPA-223ENST00000452489 ZNF843Q8N446 348 aa13□□□□□ -0.33
PTPA-223ENST00000452489 CRYBG3Q68DQ2 2970 aa13□□□□□ -0.33
PTPA-223ENST00000452489 H3BUX3 64 aa13□□□□□ -0.33
PTPA-223ENST00000452489 PRB1P04280 392 aa13□□□□□ -0.33
PTPA-223ENST00000452489 C19orf84I3L1E1 186 aa12.99□□□□□ -0.33
PTPA-223ENST00000452489 UBE2L6O14933 153 aa12.99□□□□□ -0.33
PTPA-223ENST00000452489 CSMD2Q7Z408 3487 aa12.99□□□□□ -0.33
PTPA-223ENST00000452489 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
PTPA-223ENST00000452489 LMO4P61968 165 aa12.98□□□□□ -0.33
PTPA-223ENST00000452489 TMEM254Q8TBM7 123 aa12.98□□□□□ -0.33
PTPA-223ENST00000452489 EP300Q09472 2414 aaPredicted RBP12.98□□□□□ -0.33
PTPA-223ENST00000452489 NREPQ16612 68 aa12.97□□□□□ -0.33
PTPA-223ENST00000452489 A0A087WZ39 114 aa12.97□□□□□ -0.33
PTPA-223ENST00000452489 TRBV10-1A0A0K0K1A3 114 aa12.97□□□□□ -0.33
PTPA-223ENST00000452489 CUBNO60494 3623 aa12.97□□□□□ -0.33
PTPA-223ENST00000452489 TTC28Q96AY4 2481 aa12.96□□□□□ -0.33
PTPA-223ENST00000452489 LAMTOR3Q9UHA4 124 aa12.96□□□□□ -0.34
PTPA-223ENST00000452489 LOC110117498A0A087WWA1 95 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 IGHV3OR16-9A0A0B4J2B5 98 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 PMAIP1Q13794 54 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 ESRGQ1W209 222 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 TRGV1A0A0A0MS02 117 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 CXCL6P80162 114 aa12.94□□□□□ -0.34
PTPA-223ENST00000452489 A6NDX4 124 aa12.93□□□□□ -0.34
PTPA-223ENST00000452489 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
PTPA-223ENST00000452489 IGLV4-60A0A075B6I1 120 aa12.92□□□□□ -0.34
PTPA-223ENST00000452489 TMEM89A2RUT3 159 aa12.92□□□□□ -0.34
PTPA-223ENST00000452489 C6orf99Q4VX62 202 aa12.92□□□□□ -0.34
PTPA-223ENST00000452489 A0A1W2PPR1 153 aa12.92□□□□□ -0.34
PTPA-223ENST00000452489 A8MTW9 85 aa12.91□□□□□ -0.34
PTPA-223ENST00000452489 BBC3Q96PG8 261 aaPredicted RBP12.91□□□□□ -0.34
PTPA-223ENST00000452489 ZNF561-AS1K7EIQ3 104 aa12.9□□□□□ -0.34
PTPA-223ENST00000452489 C6orf226Q5I0X4 101 aa12.9□□□□□ -0.34
PTPA-223ENST00000452489 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms