RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 HERVK_113P61574 105 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 FAM104AQ969W3 186 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.02
COL27A1-202ENST00000451716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
COL27A1-202ENST00000451716 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
COL27A1-202ENST00000451716 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
COL27A1-202ENST00000451716 CRYGAP11844 174 aa8.7□□□□□ -1.02
COL27A1-202ENST00000451716 COX7CP15954 63 aa8.7□□□□□ -1.02
COL27A1-202ENST00000451716 TIRAPP58753 221 aa8.7□□□□□ -1.02
COL27A1-202ENST00000451716 TMEM258P61165 79 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 C6orf226Q5I0X4 101 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 Q6ZTI0 123 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 C16orf95Q9H693 158 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 NBEAL2Q6ZNJ1 2754 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
COL27A1-202ENST00000451716 BEAN1Q3B7T3 259 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
COL27A1-202ENST00000451716 TRAV13-1A0A0B4J241 112 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 A0A0J9YY99 117 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 ADARB2-AS1A8MUL3 147 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 HILS1P60008 231 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 LINC00467Q9BRT7 94 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
COL27A1-202ENST00000451716 RETNQ9HD89 108 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 TMEM223A0PJW6 202 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 AMELXQ99217 191 aa8.67□□□□□ -1.02
COL27A1-202ENST00000451716 LGALS3P17931 250 aaKnown RBP8.66□□□□□ -1.02
COL27A1-202ENST00000451716 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
COL27A1-202ENST00000451716 NOP10Q9NPE3 64 aaKnown RBP8.66□□□□□ -1.02
COL27A1-202ENST00000451716 KRTAP10-3P60369 221 aa8.65□□□□□ -1.02
COL27A1-202ENST00000451716 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.02
COL27A1-202ENST00000451716 TRAV8-3A0A0A6YYJ7 113 aa8.65□□□□□ -1.03
COL27A1-202ENST00000451716 IGLV1-51P01701 117 aa8.65□□□□□ -1.03
COL27A1-202ENST00000451716 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.03
COL27A1-202ENST00000451716 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
COL27A1-202ENST00000451716 C19orf73Q9NVV2 129 aa8.64□□□□□ -1.03
COL27A1-202ENST00000451716 A8MZ25 164 aa8.64□□□□□ -1.03
COL27A1-202ENST00000451716 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
COL27A1-202ENST00000451716 LY6G6DO95868 133 aa8.63□□□□□ -1.03
COL27A1-202ENST00000451716 NSD1Q96L73 2696 aaPredicted RBP8.63□□□□□ -1.03
COL27A1-202ENST00000451716 LEPROTO15243 131 aa8.63□□□□□ -1.03
COL27A1-202ENST00000451716 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
COL27A1-202ENST00000451716 UBE2D1P51668 147 aa8.63□□□□□ -1.03
COL27A1-202ENST00000451716 SLC25A29Q8N8R3 303 aa8.63□□□□□ -1.03
COL27A1-202ENST00000451716 IMUPQ9GZP8 106 aa8.63□□□□□ -1.03
COL27A1-202ENST00000451716 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
COL27A1-202ENST00000451716 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
COL27A1-202ENST00000451716 IGHV3-30P01768 117 aa8.62□□□□□ -1.03
COL27A1-202ENST00000451716 IGHV3-30-3P0DP02 117 aa8.62□□□□□ -1.03
COL27A1-202ENST00000451716 IGHV3-30-5P0DP03 117 aa8.62□□□□□ -1.03
COL27A1-202ENST00000451716 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
COL27A1-202ENST00000451716 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
COL27A1-202ENST00000451716 ATRQ13535 2644 aa8.61□□□□□ -1.03
COL27A1-202ENST00000451716 ATP5G1P05496 136 aa8.61□□□□□ -1.03
COL27A1-202ENST00000451716 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
COL27A1-202ENST00000451716 PLAC8L1A1L4L8 177 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 SPATA3Q8NHX4 192 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 TRRAPQ9Y4A5 3859 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 TRGV2A0A075B6R0 118 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 K7EQD1 137 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 DGAT2L7PQ6IED9 249 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
COL27A1-202ENST00000451716 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 PF4P02776 101 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 CFC1BP0CG36 223 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 CFC1P0CG37 223 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
COL27A1-202ENST00000451716 SPANXDQ9BXN6 97 aa8.59□□□□□ -1.03
COL27A1-202ENST00000451716 RPL36AP83881 106 aaKnown RBP8.59□□□□□ -1.04
COL27A1-202ENST00000451716 LINC00482Q8N8I6 264 aa8.59□□□□□ -1.04
COL27A1-202ENST00000451716 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.04
COL27A1-202ENST00000451716 BRK1Q8WUW1 75 aa8.59□□□□□ -1.04
COL27A1-202ENST00000451716 RPL36ALQ969Q0 106 aaKnown RBP8.59□□□□□ -1.04
COL27A1-202ENST00000451716 CDKN2A-AS1Q9UH64 79 aa8.58□□□□□ -1.04
COL27A1-202ENST00000451716 A0A0J9YXY3 114 aa8.58□□□□□ -1.04
COL27A1-202ENST00000451716 COX6A2Q02221 97 aa8.58□□□□□ -1.04
COL27A1-202ENST00000451716 DAZ2Q13117 558 aaKnown RBP8.57□□□□□ -1.04
COL27A1-202ENST00000451716 MUSTN1Q8IVN3 82 aa8.57□□□□□ -1.04
COL27A1-202ENST00000451716 IGHV1-58A0A0C4DH39 117 aa8.57□□□□□ -1.04
COL27A1-202ENST00000451716 FAM240AA0A1B0GVK7 77 aa8.57□□□□□ -1.04
COL27A1-202ENST00000451716 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
COL27A1-202ENST00000451716 C16orf74Q96GX8 76 aa8.57□□□□□ -1.04
COL27A1-202ENST00000451716 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
COL27A1-202ENST00000451716 H7C2G1 150 aa8.56□□□□□ -1.04
COL27A1-202ENST00000451716 NPC2P61916 151 aa8.56□□□□□ -1.04
COL27A1-202ENST00000451716 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
COL27A1-202ENST00000451716 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
COL27A1-202ENST00000451716 PRSS2P07478 247 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 PRIMA1Q86XR5 153 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 TRBV10-1A0A0K0K1A3 114 aa8.55□□□□□ -1.04
COL27A1-202ENST00000451716 TRGV4A0A0C4DH28 118 aa8.54□□□□□ -1.04
COL27A1-202ENST00000451716 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms