RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
SHMT2-203ENST00000449049 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
SHMT2-203ENST00000449049 GAGE10A6NGK3 116 aa9.52□□□□□ -0.89
SHMT2-203ENST00000449049 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.89
SHMT2-203ENST00000449049 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
SHMT2-203ENST00000449049 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
SHMT2-203ENST00000449049 AMELXQ99217 191 aa9.52□□□□□ -0.89
SHMT2-203ENST00000449049 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
SHMT2-203ENST00000449049 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
SHMT2-203ENST00000449049 GTF2H5Q6ZYL4 71 aa9.5□□□□□ -0.89
SHMT2-203ENST00000449049 H3BRM9 83 aa9.5□□□□□ -0.89
SHMT2-203ENST00000449049 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
SHMT2-203ENST00000449049 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
SHMT2-203ENST00000449049 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
SHMT2-203ENST00000449049 C9orf118A6NHY6 69 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 CKS1BP61024 79 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 VCX2Q9H322 139 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 REG3AQ06141 175 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 PMVKQ15126 192 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 C10orf126Q8N4M7 172 aa9.49□□□□□ -0.89
SHMT2-203ENST00000449049 H0Y8G0 127 aa9.48□□□□□ -0.89
SHMT2-203ENST00000449049 LY6G6CO95867 125 aa9.48□□□□□ -0.89
SHMT2-203ENST00000449049 TRAV12-1A0A0B4J245 112 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 A6NDN8 102 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 PRSS1P07477 247 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 ENHOQ6UWT2 76 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 KRTAP1-5Q9BYS1 174 aa9.47□□□□□ -0.89
SHMT2-203ENST00000449049 NBDYA0A0U1RRE5 68 aa9.46□□□□□ -0.89
SHMT2-203ENST00000449049 PRSS29PA6NIE9 313 aa9.46□□□□□ -0.89
SHMT2-203ENST00000449049 K7EP34 96 aa9.46□□□□□ -0.89
SHMT2-203ENST00000449049 LYSTQ99698 3801 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 CRPP02741 224 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 UBE2D1P51668 147 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 TENM2Q9NT68 2774 aa9.46□□□□□ -0.9
SHMT2-203ENST00000449049 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
SHMT2-203ENST00000449049 DNAH1Q9P2D7 4330 aa9.45□□□□□ -0.9
SHMT2-203ENST00000449049 LINC00959A0A1B0GUT2 108 aa9.45□□□□□ -0.9
SHMT2-203ENST00000449049 MTURNQ8N3F0 131 aa9.45□□□□□ -0.9
SHMT2-203ENST00000449049 IGKV3OR2-268A0A0C4DH90 116 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 MIAQ16674 131 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 H3BUT2 72 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 HSD52Q0P140 79 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 ODF1Q14990 250 aa9.44□□□□□ -0.9
SHMT2-203ENST00000449049 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
SHMT2-203ENST00000449049 ALMS1Q8TCU4 4167 aa9.43□□□□□ -0.9
SHMT2-203ENST00000449049 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
SHMT2-203ENST00000449049 SS18Q15532 418 aa9.43□□□□□ -0.9
SHMT2-203ENST00000449049 Q6ZR54 194 aa9.43□□□□□ -0.9
SHMT2-203ENST00000449049 IGLV4-69A0A075B6H9 119 aa9.42□□□□□ -0.9
SHMT2-203ENST00000449049 F8VRH5 84 aa9.42□□□□□ -0.9
SHMT2-203ENST00000449049 TSPAN13O95857 204 aa9.42□□□□□ -0.9
SHMT2-203ENST00000449049 LINC00242Q5T6M2 205 aa9.42□□□□□ -0.9
SHMT2-203ENST00000449049 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
SHMT2-203ENST00000449049 LCE6AA0A183 80 aa9.41□□□□□ -0.9
SHMT2-203ENST00000449049 MRPL35Q9NZE8 188 aaKnown RBP9.41□□□□□ -0.9
SHMT2-203ENST00000449049 A0A1W2PPM0 123 aa9.41□□□□□ -0.9
SHMT2-203ENST00000449049 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.9
SHMT2-203ENST00000449049 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
SHMT2-203ENST00000449049 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
SHMT2-203ENST00000449049 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-203ENST00000449049 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
SHMT2-203ENST00000449049 Q9HAA7 133 aa9.4□□□□□ -0.9
SHMT2-203ENST00000449049 KRTAP26-1Q6PEX3 210 aa9.4□□□□□ -0.91
SHMT2-203ENST00000449049 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 M0R2N4 97 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 HERVK_113P63121 156 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 COX6A2Q02221 97 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 C1orf43Q9BWL3 253 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 SPCS1Q9Y6A9 102 aa9.39□□□□□ -0.91
SHMT2-203ENST00000449049 XCL1P47992 114 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 RMI2Q96E14 147 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 NAA38Q9BRA0 125 aaKnown RBP9.38□□□□□ -0.91
SHMT2-203ENST00000449049 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 C11orf86A6NJI1 115 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 PLNP26678 52 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 FOXI1Q12951 378 aa9.38□□□□□ -0.91
SHMT2-203ENST00000449049 IGHV3OR16-9A0A0B4J2B5 98 aa9.37□□□□□ -0.91
SHMT2-203ENST00000449049 DPM2O94777 84 aa9.37□□□□□ -0.91
SHMT2-203ENST00000449049 FABP2P12104 132 aa9.37□□□□□ -0.91
SHMT2-203ENST00000449049 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
SHMT2-203ENST00000449049 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
SHMT2-203ENST00000449049 IGKCP01834 107 aa9.36□□□□□ -0.91
SHMT2-203ENST00000449049 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-203ENST00000449049 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
SHMT2-203ENST00000449049 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
SHMT2-203ENST00000449049 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-203ENST00000449049 C6orf223Q8N319 242 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms