RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MT-ND6P03923 174 aa9.48□□□□□ -0.89
HDAC4-204ENST00000446876 COX6A2Q02221 97 aa9.48□□□□□ -0.89
HDAC4-204ENST00000446876 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
HDAC4-204ENST00000446876 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
HDAC4-204ENST00000446876 ZNF561-AS1K7EIQ3 104 aa9.47□□□□□ -0.89
HDAC4-204ENST00000446876 K7EMI3 77 aa9.47□□□□□ -0.89
HDAC4-204ENST00000446876 LINC00173Q6ZV60 143 aa9.47□□□□□ -0.89
HDAC4-204ENST00000446876 CARD19Q96LW7 228 aa9.47□□□□□ -0.89
HDAC4-204ENST00000446876 IGHV3OR16-9A0A0B4J2B5 98 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 IGIPA6NJ69 53 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 TEX43Q6ZNM6 134 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 SLC7A5P1Q8MH63 180 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.9
HDAC4-204ENST00000446876 IGKV2-24A0A0C4DH68 120 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 SPAG11BQ08648 103 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
HDAC4-204ENST00000446876 LINC00242Q5T6M2 205 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
HDAC4-204ENST00000446876 UBE2D1P51668 147 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 Q6ZN92 141 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 Q6ZRU5 148 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 YPEL4Q96NS1 127 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 AMELXQ99217 191 aa9.44□□□□□ -0.9
HDAC4-204ENST00000446876 A0A096LNI7 61 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 APOMO95445 188 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 DPH3Q96FX2 82 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 VCX2Q9H322 139 aa9.43□□□□□ -0.9
HDAC4-204ENST00000446876 A0A087WYN8 130 aa9.42□□□□□ -0.9
HDAC4-204ENST00000446876 PLA2G1BP04054 148 aaKnown RBP9.42□□□□□ -0.9
HDAC4-204ENST00000446876 CBLN2Q8IUK8 224 aa9.42□□□□□ -0.9
HDAC4-204ENST00000446876 CAMK2N2Q96S95 79 aa9.42□□□□□ -0.9
HDAC4-204ENST00000446876 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
HDAC4-204ENST00000446876 SMCO4Q9NRQ5 59 aa9.42□□□□□ -0.9
HDAC4-204ENST00000446876 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
HDAC4-204ENST00000446876 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
HDAC4-204ENST00000446876 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
HDAC4-204ENST00000446876 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
HDAC4-204ENST00000446876 URB1-AS1Q96HZ7 61 aa9.41□□□□□ -0.9
HDAC4-204ENST00000446876 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
HDAC4-204ENST00000446876 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
HDAC4-204ENST00000446876 A0A087WZ39 114 aa9.4□□□□□ -0.9
HDAC4-204ENST00000446876 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
HDAC4-204ENST00000446876 NPSP0C0P6 89 aa9.4□□□□□ -0.9
HDAC4-204ENST00000446876 G0S2P27469 103 aa9.4□□□□□ -0.9
HDAC4-204ENST00000446876 C2orf48Q96LS8 159 aa9.4□□□□□ -0.9
HDAC4-204ENST00000446876 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
HDAC4-204ENST00000446876 ERASQ7Z444 233 aa9.39□□□□□ -0.91
HDAC4-204ENST00000446876 RPL37AP61513 92 aaKnown RBP9.38□□□□□ -0.91
HDAC4-204ENST00000446876 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
HDAC4-204ENST00000446876 C10orf25Q5T742 122 aa9.38□□□□□ -0.91
HDAC4-204ENST00000446876 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
HDAC4-204ENST00000446876 A0A096LNJ9 63 aa9.37□□□□□ -0.91
HDAC4-204ENST00000446876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-204ENST00000446876 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
HDAC4-204ENST00000446876 PMCHL1Q16048 86 aa9.37□□□□□ -0.91
HDAC4-204ENST00000446876 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
HDAC4-204ENST00000446876 STPG4Q8N801 248 aa9.37□□□□□ -0.91
HDAC4-204ENST00000446876 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
HDAC4-204ENST00000446876 KIAA0087Q14695 138 aa9.36□□□□□ -0.91
HDAC4-204ENST00000446876 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
HDAC4-204ENST00000446876 PKHD1L1Q86WI1 4243 aa9.36□□□□□ -0.91
HDAC4-204ENST00000446876 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 NDUFA1O15239 70 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 LINC00614P0C842 121 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
HDAC4-204ENST00000446876 C2orf82Q6UX34 121 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 PKIGQ9Y2B9 76 aa9.35□□□□□ -0.91
HDAC4-204ENST00000446876 HERVK_113P63121 156 aa9.34□□□□□ -0.91
HDAC4-204ENST00000446876 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
HDAC4-204ENST00000446876 GEMIN7Q9H840 131 aaKnown RBP9.34□□□□□ -0.91
HDAC4-204ENST00000446876 MRPL35Q9NZE8 188 aaKnown RBP9.34□□□□□ -0.91
HDAC4-204ENST00000446876 C6orf48Q9UBA6 75 aa9.34□□□□□ -0.91
HDAC4-204ENST00000446876 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
HDAC4-204ENST00000446876 HNRNPA3P51991 378 aaKnown RBP9.33□□□□□ -0.92
HDAC4-204ENST00000446876 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
HDAC4-204ENST00000446876 TOMM7Q9P0U1 55 aa9.33□□□□□ -0.92
HDAC4-204ENST00000446876 LINC00474Q9P2X8 69 aa9.33□□□□□ -0.92
HDAC4-204ENST00000446876 F8WDY8 70 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 HBDP02042 147 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 SEC11AP67812 179 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 PMVKQ15126 192 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 RNF151Q2KHN1 245 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
HDAC4-204ENST00000446876 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
HDAC4-204ENST00000446876 PACRGQ96M98 296 aaPredicted RBP9.31□□□□□ -0.92
HDAC4-204ENST00000446876 A0A1W2PNN7 141 aa9.3□□□□□ -0.92
HDAC4-204ENST00000446876 PRSS2P07478 247 aa9.3□□□□□ -0.92
HDAC4-204ENST00000446876 NDUFA6P56556 154 aa9.3□□□□□ -0.92
HDAC4-204ENST00000446876 RAB5BP61020 215 aa9.3□□□□□ -0.92
HDAC4-204ENST00000446876 PDZD11Q5EBL8 140 aa9.3□□□□□ -0.92
HDAC4-204ENST00000446876 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms