RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 DYNLRB2Q8TF09 96 aa13.6□□□□□ -0.23
PMPCB-204ENST00000444457 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
PMPCB-204ENST00000444457 APCP25054 2843 aa13.59□□□□□ -0.23
PMPCB-204ENST00000444457 MYO9AB2RTY4 2548 aa13.59□□□□□ -0.23
PMPCB-204ENST00000444457 ZNF469Q96JG9 3925 aaPredicted RBP13.59□□□□□ -0.23
PMPCB-204ENST00000444457 PROK1P58294 105 aa13.59□□□□□ -0.23
PMPCB-204ENST00000444457 SOSTDC1Q6X4U4 206 aa13.59□□□□□ -0.23
PMPCB-204ENST00000444457 HIST2H2BDQ6DRA6 164 aa13.58□□□□□ -0.24
PMPCB-204ENST00000444457 Q9H8V8 135 aa13.58□□□□□ -0.24
PMPCB-204ENST00000444457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.58□□□□□ -0.24
PMPCB-204ENST00000444457 IGKV2-29A2NJV5 120 aaPredicted RBP13.58□□□□□ -0.24
PMPCB-204ENST00000444457 ZNF415Q09FC8 603 aa13.58□□□□□ -0.24
PMPCB-204ENST00000444457 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.58□□□□□ -0.24
PMPCB-204ENST00000444457 FAM218AQ96MZ4 157 aa13.58□□□□□ -0.24
PMPCB-204ENST00000444457 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 hADV29S1A0JD25 119 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 DEFB114Q30KQ6 69 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 PIK3CD-AS1Q5SR53 167 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 OR13C6PQ8NH95 151 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 LINC00467Q9BRT7 94 aa13.57□□□□□ -0.24
PMPCB-204ENST00000444457 TMEM86BQ8N661 226 aa13.56□□□□□ -0.24
PMPCB-204ENST00000444457 AKAP9Q99996 3911 aa13.55□□□□□ -0.24
PMPCB-204ENST00000444457 RPL18AQ02543 176 aaKnown RBP13.55□□□□□ -0.24
PMPCB-204ENST00000444457 CYSTM1Q9H1C7 97 aa13.55□□□□□ -0.24
PMPCB-204ENST00000444457 Q9UF83 564 aa13.54□□□□□ -0.24
PMPCB-204ENST00000444457 TLN2Q9Y4G6 2542 aa13.54□□□□□ -0.24
PMPCB-204ENST00000444457 WIPF1O43516 503 aa13.54□□□□□ -0.24
PMPCB-204ENST00000444457 MALP21145 153 aa13.53□□□□□ -0.24
PMPCB-204ENST00000444457 C11orf72Q8NBR9 251 aa13.53□□□□□ -0.24
PMPCB-204ENST00000444457 HECTD1Q9ULT8 2610 aa13.53□□□□□ -0.24
PMPCB-204ENST00000444457 TMEM258P61165 79 aa13.53□□□□□ -0.24
PMPCB-204ENST00000444457 ZNF625Q96I27 306 aaPredicted RBP13.53□□□□□ -0.24
PMPCB-204ENST00000444457 A0A0U1RRA0 63 aa13.52□□□□□ -0.24
PMPCB-204ENST00000444457 INSP01308 110 aa13.52□□□□□ -0.24
PMPCB-204ENST00000444457 COX6A2Q02221 97 aa13.52□□□□□ -0.24
PMPCB-204ENST00000444457 Q6ZSN1 163 aa13.52□□□□□ -0.24
PMPCB-204ENST00000444457 ITPR2Q14571 2701 aa13.52□□□□□ -0.25
PMPCB-204ENST00000444457 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
PMPCB-204ENST00000444457 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
PMPCB-204ENST00000444457 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 WFDC11Q8NEX6 87 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 DPH3Q96FX2 82 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 ITPR3Q14573 2671 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 ODF3L2Q3SX64 289 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
PMPCB-204ENST00000444457 SONP18583 2426 aaKnown RBP13.49□□□□□ -0.25
PMPCB-204ENST00000444457 Q6JHZ5 121 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 Q9HAA7 133 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 IGHV3OR16-12A0A075B7B8 117 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 TRAV13-1A0A0B4J241 112 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 RPL28P46779 137 aaKnown RBP13.49□□□□□ -0.25
PMPCB-204ENST00000444457 LINC00242Q5T6M2 205 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 SERP2Q8N6R1 65 aa13.49□□□□□ -0.25
PMPCB-204ENST00000444457 SMIM1B2RUZ4 78 aa13.48□□□□□ -0.25
PMPCB-204ENST00000444457 DNAL4O96015 105 aa13.48□□□□□ -0.25
PMPCB-204ENST00000444457 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 C11orf44Q8N8P7 122 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 WNK1Q9H4A3 2382 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 PF4P02776 101 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 KIR2DL5BQ8NHK3 375 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 XCL2Q9UBD3 114 aa13.47□□□□□ -0.25
PMPCB-204ENST00000444457 TRAV25A0A0B4J276 109 aa13.46□□□□□ -0.25
PMPCB-204ENST00000444457 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.25
PMPCB-204ENST00000444457 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
PMPCB-204ENST00000444457 RS1O15537 224 aa13.46□□□□□ -0.25
PMPCB-204ENST00000444457 ESM1Q9NQ30 184 aa13.46□□□□□ -0.25
PMPCB-204ENST00000444457 STHQ8IWL8 128 aa13.45□□□□□ -0.26
PMPCB-204ENST00000444457 OVOL2Q9BRP0 275 aa13.45□□□□□ -0.26
PMPCB-204ENST00000444457 DGAT2L7PQ6IED9 249 aa13.45□□□□□ -0.26
PMPCB-204ENST00000444457 OBSCN-AS1Q96MR7 158 aa13.45□□□□□ -0.26
PMPCB-204ENST00000444457 TRAV13-2A0A0B4J235 113 aa13.44□□□□□ -0.26
PMPCB-204ENST00000444457 CCL24O00175 119 aa13.44□□□□□ -0.26
PMPCB-204ENST00000444457 IGKV3D-7A0A0C4DH55 119 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 C9orf129Q5T035 196 aaKnown RBP13.43□□□□□ -0.26
PMPCB-204ENST00000444457 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 OXTP01178 125 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 C1orf158Q8N1D5 194 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 C14orf132Q9NPU4 83 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 LINC00846Q9NV44 126 aa13.43□□□□□ -0.26
PMPCB-204ENST00000444457 LINC01561Q8N1V8 128 aa13.42□□□□□ -0.26
PMPCB-204ENST00000444457 CRPP02741 224 aa13.41□□□□□ -0.26
PMPCB-204ENST00000444457 IL17DQ8TAD2 202 aa13.41□□□□□ -0.26
PMPCB-204ENST00000444457 FLNAP21333 2647 aaKnown RBP13.41□□□□□ -0.26
PMPCB-204ENST00000444457 A0A087WVE0 104 aa13.4□□□□□ -0.26
PMPCB-204ENST00000444457 F5H768 121 aa13.4□□□□□ -0.26
PMPCB-204ENST00000444457 USP17L23D6RBM5 183 aa13.4□□□□□ -0.26
PMPCB-204ENST00000444457 LINC00337Q8N6G1 96 aa13.4□□□□□ -0.26
PMPCB-204ENST00000444457 DSCR8Q96T75 97 aa13.4□□□□□ -0.26
PMPCB-204ENST00000444457 A0A087WYN8 130 aa13.39□□□□□ -0.27
PMPCB-204ENST00000444457 PDZD2O15018 2839 aa13.39□□□□□ -0.27
PMPCB-204ENST00000444457 NF1P21359 2839 aa13.39□□□□□ -0.27
PMPCB-204ENST00000444457 CUBNO60494 3623 aa13.39□□□□□ -0.27
PMPCB-204ENST00000444457 NOTCH2Q04721 2471 aa13.39□□□□□ -0.27
PMPCB-204ENST00000444457 TRGV1A0A0A0MS02 117 aa13.38□□□□□ -0.27
PMPCB-204ENST00000444457 IGKV2-28A0A075B6P5 120 aa13.37□□□□□ -0.27
PMPCB-204ENST00000444457 IGKV2D-28P01615 120 aa13.37□□□□□ -0.27
PMPCB-204ENST00000444457 KRTAP1-1Q07627 177 aa13.36□□□□□ -0.27
PMPCB-204ENST00000444457 Q5XG85 94 aa13.36□□□□□ -0.27
PMPCB-204ENST00000444457 SMIM11BQ8TCY0 68 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms