RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 A0A0J9YXY3 114 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 F6UB75 175 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 H7BZZ5 65 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 PSPHP1O15172 72 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 IGHV4-38-2P0DP08 117 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 CFHR3Q02985 330 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 ESRGQ1W209 222 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 WDR86Q86TI4 376 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 PRR15Q8IV56 129 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 LYPD1Q8N2G4 141 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 CPAMD8Q8IZJ3 1885 aa2.07□□□□□ -2.08
LIG4-203ENST00000442234 LRCOL1A6NCL2 159 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TMEM256-PLSCR3K7ERE1 68 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGLV2-11P01706 119 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGHV4-59P01825 116 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 MSMBP08118 114 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGHV1-2P23083 117 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 FUSP35637 526 aaKnown RBP eCLIP2.06□□□□□ -2.08
LIG4-203ENST00000442234 DCANP1Q8TF63 244 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TMEM141Q96I45 108 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 OVOL2Q9BRP0 275 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 LINC00846Q9NV44 126 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 UBE2D4Q9Y2X8 147 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TRRAPQ9Y4A5 3859 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 MUC4Q99102 2169 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3-72A0A0B4J1Y9 119 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TEX22C9J3V5 150 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGKV1-16P04430 117 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 UBE2BP63146 152 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 ADAMTSL4-AS1Q5T5F5 129 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 ATP5EP2Q5VTU8 51 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 THAP8Q8NA92 274 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
LIG4-203ENST00000442234 UBE2E2Q96LR5 201 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 C16orf95Q9H693 158 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGHV1-69DA0A0B4J2H0 117 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGKV3D-20A0A0C4DH25 116 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TRBV6-1A0A0K0K1D8 114 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 M0R2N4 97 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 CRPP02741 224 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
LIG4-203ENST00000442234 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
LIG4-203ENST00000442234 DEFB136Q30KP8 78 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 DEFB112Q30KQ8 113 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 IGFL4Q6B9Z1 124 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 TMEM61Q8N0U2 210 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 MRPL36Q9P0J6 103 aaKnown RBP2.06□□□□□ -2.08
LIG4-203ENST00000442234 TMEM14CQ9P0S9 112 aa2.06□□□□□ -2.08
LIG4-203ENST00000442234 RYR2Q92736 4967 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 E7EUB6 86 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 MIFP14174 115 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 HTN3P15516 51 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 RPL28P46779 137 aaKnown RBP2.05□□□□□ -2.08
LIG4-203ENST00000442234 WT1-ASQ06250 92 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 MIAQ16674 131 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 FAM74A4Q5TZK3 123 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 Q6ZRU5 148 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 CCDC140Q96MF4 163 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 IGKV1D-37A0A075B6S9 117 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 TRAV13-2A0A0B4J235 113 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 A0A0J9YXV3 536 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 TRBV27A0A0K0K1C4 114 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 DNAJC9-AS1A6NH13 148 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 LYRM9A8MSI8 78 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 H3BUX3 64 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 PROP1O75360 226 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 MED14OSP0DP75 135 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 KLF14Q8TD94 323 aaPredicted RBP2.05□□□□□ -2.08
LIG4-203ENST00000442234 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 CXXC4Q9H2H0 198 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 NDUFA4L2Q9NRX3 87 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 IGKV3D-11A0A0A0MRZ8 115 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 VCYO14598 125 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3-30-3P0DP02 117 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 CD28P10747 220 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 ZNF80P51504 273 aaPredicted RBP2.05□□□□□ -2.08
LIG4-203ENST00000442234 FAM222AQ5U5X8 452 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 ZNRF1Q8ND25 227 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 CCL13Q99616 98 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 S4R3C0 116 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 LRP4O75096 1905 aa2.05□□□□□ -2.08
LIG4-203ENST00000442234 IGLV4-69A0A075B6H9 119 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3-35A0A0C4DH35 117 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 C10orf142B7Z368 130 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 NCR3O14931 201 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 NDUFS5O43920 106 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 IGHV3-11P01762 117 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 PDE6HQ13956 83 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 RNASE13Q5GAN3 156 aaKnown RBP2.04□□□□□ -2.08
LIG4-203ENST00000442234 PIK3CD-AS1Q5SR53 167 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 LINC01546A6NGU7 62 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 BUB1B-PAK6H3BSN5 160 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 BEAN1Q3B7T3 259 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 KRTAP5-3Q6L8H2 238 aa2.04□□□□□ -2.08
LIG4-203ENST00000442234 LYPD5Q6UWN5 251 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms