RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 HIST1H2BLQ99880 126 aa3.21□□□□□ -1.9
PTPN4-206ENST00000441089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-206ENST00000441089 IGLV5-39A0A0G2JS06 123 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 IGKV2-29A2NJV5 120 aaPredicted RBP3.2□□□□□ -1.9
PTPN4-206ENST00000441089 H3BNG1 76 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 HSBP1O75506 76 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 HBDP02042 147 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 RPL39P62891 51 aaKnown RBP3.2□□□□□ -1.9
PTPN4-206ENST00000441089 COTL1Q14019 142 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 ORMDL2Q53FV1 153 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 C2orf66Q6UXQ4 117 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 DAZ4Q86SG3 579 aaKnown RBP3.2□□□□□ -1.9
PTPN4-206ENST00000441089 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 TOMM6Q96B49 74 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 KIR2DL4Q99706 377 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 GTSF1LQ9H1H1 148 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 DAZ3Q9NR90 486 aaKnown RBP3.2□□□□□ -1.9
PTPN4-206ENST00000441089 ICOSQ9Y6W8 199 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 TNXBP22105 4242 aa3.2□□□□□ -1.9
PTPN4-206ENST00000441089 TRBV6-8A0A0A6YYG3 113 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 IGIPA6NJ69 53 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 K7EMI3 77 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 FABP4P15090 132 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 MRPL23Q16540 153 aaKnown RBP3.19□□□□□ -1.9
PTPN4-206ENST00000441089 ESRGQ1W209 222 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 ZC2HC1BQ5TFG8 222 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 LYPD5Q6UWN5 251 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 Q8N976 141 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 OR10D4PQ8NGN7 298 aa3.19□□□□□ -1.9
PTPN4-206ENST00000441089 PACRGQ96M98 296 aaPredicted RBP3.19□□□□□ -1.9
PTPN4-206ENST00000441089 OPRPNQ99935 248 aaPredicted RBP3.19□□□□□ -1.9
PTPN4-206ENST00000441089 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 IGLV4-3A0A075B6K6 122 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 PRYO14603 147 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 C3orf79P0CE67 100 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 S100A2P29034 98 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 GAGE6Q13070 117 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 LELP1Q5T871 98 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 TMEM18Q96B42 140 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 IFI27L1Q96BM0 104 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 TMEM243Q9BU79 118 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 Q9H8V8 135 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 UBE2D4Q9Y2X8 147 aa3.18□□□□□ -1.9
PTPN4-206ENST00000441089 TRBV25-1A0A075B6N4 114 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 FGF6P10767 208 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 FUSP35637 526 aaKnown RBP eCLIP3.17□□□□□ -1.9
PTPN4-206ENST00000441089 HAMPP81172 84 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 TMEM97Q5BJF2 176 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 RNASE13Q5GAN3 156 aaKnown RBP3.17□□□□□ -1.9
PTPN4-206ENST00000441089 Q6ZUT4 128 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 ERASQ7Z444 233 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
PTPN4-206ENST00000441089 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 BAALCQ8WXS3 180 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 SCGB3A1Q96QR1 104 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 TIMM17AQ99595 171 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 TIMM21Q9BVV7 248 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 PYGO1Q9Y3Y4 419 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 LINC00588Q9Y4M8 146 aa3.17□□□□□ -1.9
PTPN4-206ENST00000441089 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 H0Y8G0 127 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 SYS1-DBNDD2H3BUS1 97 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 H7C423 109 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 ATP5LO75964 103 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 KRTDAPP60985 99 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 RBX1P62877 108 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 MRPS36P82909 103 aaKnown RBP3.16□□□□□ -1.9
PTPN4-206ENST00000441089 MPV17L2Q567V2 206 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 PYY3Q5JQD4 70 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 AMELXQ99217 191 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 PMCHL2Q9BQD1 86 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 CDC42SE2Q9NRR3 84 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
PTPN4-206ENST00000441089 CSDC2Q9Y534 153 aaKnown RBP3.16□□□□□ -1.9
PTPN4-206ENST00000441089 IGLV4-69A0A075B6H9 119 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 TRAV12-1A0A0B4J245 112 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
PTPN4-206ENST00000441089 UBE2L6O14933 153 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3-33P01772 117 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 G0S2P27469 103 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 AKR1D1P51857 326 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 JOSD1Q15040 202 aaPredicted RBP3.15□□□□□ -1.91
PTPN4-206ENST00000441089 LINC01545Q5VT33 79 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 PET117Q6UWS5 81 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 Q6ZN92 141 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 Q6ZRN7 208 aaPredicted RBP3.15□□□□□ -1.91
PTPN4-206ENST00000441089 NFE4Q86UQ8 179 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 OR5A1Q8NGJ0 315 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 TMEM141Q96I45 108 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 MAP1LC3CQ9BXW4 147 aa3.15□□□□□ -1.91
PTPN4-206ENST00000441089 CST9LQ9H4G1 147 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms