RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 IGHV1-58A0A0C4DH39 117 aa13.73□□□□□ -0.21
VRK2-207ENST00000440705 PLEKHB2Q96CS7 222 aa13.73□□□□□ -0.21
VRK2-207ENST00000440705 APLNQ9ULZ1 77 aa13.73□□□□□ -0.21
VRK2-207ENST00000440705 IGHV3OR16-9A0A0B4J2B5 98 aa13.72□□□□□ -0.21
VRK2-207ENST00000440705 HNRNPA3P51991 378 aaKnown RBP13.72□□□□□ -0.21
VRK2-207ENST00000440705 J3QQQ9 107 aa13.72□□□□□ -0.21
VRK2-207ENST00000440705 SPINK8P0C7L1 97 aa13.72□□□□□ -0.21
VRK2-207ENST00000440705 DNAH10OSP0CZ25 163 aa13.72□□□□□ -0.21
VRK2-207ENST00000440705 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.21
VRK2-207ENST00000440705 CRPP02741 224 aa13.71□□□□□ -0.21
VRK2-207ENST00000440705 UPK3BQ9BT76 320 aa13.71□□□□□ -0.21
VRK2-207ENST00000440705 TTTY13Q9BZ97 58 aa13.71□□□□□ -0.21
VRK2-207ENST00000440705 TRAV8-3A0A0A6YYJ7 113 aa13.7□□□□□ -0.22
VRK2-207ENST00000440705 SIVA1O15304 175 aa13.7□□□□□ -0.22
VRK2-207ENST00000440705 LGALS3P17931 250 aaKnown RBP13.7□□□□□ -0.22
VRK2-207ENST00000440705 XCL1P47992 114 aa13.7□□□□□ -0.22
VRK2-207ENST00000440705 MAPKAPK5-AS1Q8N8E1 139 aa13.7□□□□□ -0.22
VRK2-207ENST00000440705 TP73-AS1Q9UF72 201 aa13.7□□□□□ -0.22
VRK2-207ENST00000440705 MYMXA0A1B0GTQ4 84 aa13.69□□□□□ -0.22
VRK2-207ENST00000440705 CD164L2Q6UWJ8 174 aa13.69□□□□□ -0.22
VRK2-207ENST00000440705 ENHOQ6UWT2 76 aa13.69□□□□□ -0.22
VRK2-207ENST00000440705 CHCHD10Q8WYQ3 142 aaPredicted RBP13.69□□□□□ -0.22
VRK2-207ENST00000440705 A0A087WZ39 114 aa13.69□□□□□ -0.22
VRK2-207ENST00000440705 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 IGLV5-39A0A0G2JS06 123 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 ZNF815PA8K554 130 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 LINC00587B1AMM8 73 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 SMIM1B2RUZ4 78 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 UBE2WQ96B02 151 aa13.68□□□□□ -0.22
VRK2-207ENST00000440705 IGLV10-54A0A075B6I4 117 aa13.67□□□□□ -0.22
VRK2-207ENST00000440705 TSPEAR-AS2P59090 65 aa13.67□□□□□ -0.22
VRK2-207ENST00000440705 MIAQ16674 131 aa13.67□□□□□ -0.22
VRK2-207ENST00000440705 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
VRK2-207ENST00000440705 LINC01561Q8N1V8 128 aa13.66□□□□□ -0.22
VRK2-207ENST00000440705 CTAG1AP78358 180 aa13.65□□□□□ -0.22
VRK2-207ENST00000440705 C2orf91Q6ZV80 131 aa13.65□□□□□ -0.22
VRK2-207ENST00000440705 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
VRK2-207ENST00000440705 Q9H8V8 135 aa13.64□□□□□ -0.23
VRK2-207ENST00000440705 FBN3Q75N90 2809 aa13.64□□□□□ -0.23
VRK2-207ENST00000440705 COX7A2LO14548 114 aa13.63□□□□□ -0.23
VRK2-207ENST00000440705 HIGD1BQ9P298 99 aa13.63□□□□□ -0.23
VRK2-207ENST00000440705 ZFAND6Q6FIF0 208 aa13.63□□□□□ -0.23
VRK2-207ENST00000440705 C10orf126Q8N4M7 172 aa13.63□□□□□ -0.23
VRK2-207ENST00000440705 FOXI1Q12951 378 aa13.62□□□□□ -0.23
VRK2-207ENST00000440705 SCGB1D4Q6XE38 83 aa13.62□□□□□ -0.23
VRK2-207ENST00000440705 NDUFA12Q9UI09 145 aa13.62□□□□□ -0.23
VRK2-207ENST00000440705 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
VRK2-207ENST00000440705 K7EP13 123 aa13.61□□□□□ -0.23
VRK2-207ENST00000440705 IBA57-AS1B1ANH7 110 aa13.59□□□□□ -0.23
VRK2-207ENST00000440705 MALP21145 153 aa13.59□□□□□ -0.23
VRK2-207ENST00000440705 MUC7Q8TAX7 377 aa13.59□□□□□ -0.23
VRK2-207ENST00000440705 DYNC2H1Q8NCM8 4307 aaKnown RBP13.59□□□□□ -0.23
VRK2-207ENST00000440705 COX7B2Q8TF08 81 aa13.59□□□□□ -0.23
VRK2-207ENST00000440705 NDUFA1O15239 70 aa13.58□□□□□ -0.24
VRK2-207ENST00000440705 C1orf43Q9BWL3 253 aa13.58□□□□□ -0.24
VRK2-207ENST00000440705 WWC2-AS2Q96NR7 200 aa13.57□□□□□ -0.24
VRK2-207ENST00000440705 TOMM7Q9P0U1 55 aa13.57□□□□□ -0.24
VRK2-207ENST00000440705 APOMO95445 188 aa13.56□□□□□ -0.24
VRK2-207ENST00000440705 PRSS2P07478 247 aa13.55□□□□□ -0.24
VRK2-207ENST00000440705 DNAH7Q8WXX0 4024 aa13.55□□□□□ -0.24
VRK2-207ENST00000440705 A0A0J9YXY3 114 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 M0R143 59 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 HSD52Q0P140 79 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 KRTAP26-1Q6PEX3 210 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 Q8IZM0 81 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 CSMD3Q7Z407 3707 aa13.54□□□□□ -0.24
VRK2-207ENST00000440705 IGKV2D-24A0A075B6R9 120 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 HERV-K104P63124 156 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 SFTA2Q6UW10 78 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 ORAOV1Q8WV07 137 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 ZNF625Q96I27 306 aaPredicted RBP13.53□□□□□ -0.24
VRK2-207ENST00000440705 Q9HAA7 133 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 TAL2Q16559 108 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 RMI2Q96E14 147 aa13.53□□□□□ -0.24
VRK2-207ENST00000440705 HINT1P49773 126 aaPredicted RBP13.52□□□□□ -0.25
VRK2-207ENST00000440705 HIST1H4GQ99525 98 aa13.52□□□□□ -0.25
VRK2-207ENST00000440705 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
VRK2-207ENST00000440705 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
VRK2-207ENST00000440705 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
VRK2-207ENST00000440705 SPANXB1Q9NS25 103 aaPredicted RBP13.5□□□□□ -0.25
VRK2-207ENST00000440705 CFAP161Q6P656 301 aa13.5□□□□□ -0.25
VRK2-207ENST00000440705 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
VRK2-207ENST00000440705 KIAA0087Q14695 138 aa13.49□□□□□ -0.25
VRK2-207ENST00000440705 BATFQ16520 125 aa13.49□□□□□ -0.25
VRK2-207ENST00000440705 BVES-AS1Q5T3Y7 98 aa13.49□□□□□ -0.25
VRK2-207ENST00000440705 TIMM17BO60830 172 aa13.48□□□□□ -0.25
VRK2-207ENST00000440705 CXCL5P42830 114 aa13.48□□□□□ -0.25
VRK2-207ENST00000440705 COX11Q9Y6N1 276 aa13.48□□□□□ -0.25
VRK2-207ENST00000440705 CKS1BP61024 79 aa13.47□□□□□ -0.25
VRK2-207ENST00000440705 CEND1Q8N111 149 aa13.47□□□□□ -0.25
VRK2-207ENST00000440705 TTC32Q5I0X7 151 aa13.47□□□□□ -0.25
VRK2-207ENST00000440705 EREGO14944 169 aa13.46□□□□□ -0.26
VRK2-207ENST00000440705 GCSHP23434 173 aa13.46□□□□□ -0.26
VRK2-207ENST00000440705 SPAG11BQ08648 103 aa13.46□□□□□ -0.26
VRK2-207ENST00000440705 MEIG1Q5JSS6 88 aa13.45□□□□□ -0.26
VRK2-207ENST00000440705 LITAFQ99732 161 aa13.45□□□□□ -0.26
VRK2-207ENST00000440705 TM2D2Q9BX73 214 aa13.45□□□□□ -0.26
VRK2-207ENST00000440705 KRTAP1-5Q9BYS1 174 aa13.45□□□□□ -0.26
VRK2-207ENST00000440705 Q6ZVH6 145 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms