RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 OR2H1Q9GZK4 316 aa0.62□□□□□ -2.31
VPS41-207ENST00000439468 TRAV5A0A0B4J249 113 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 H7BYZ3 331 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 SCTP09683 121 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 MPC1LP0DKB6 136 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 RPL35P42766 123 aaKnown RBP0.61□□□□□ -2.31
VPS41-207ENST00000439468 SRP9P49458 86 aaKnown RBP0.61□□□□□ -2.31
VPS41-207ENST00000439468 CCL18P55774 89 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 CAV3P56539 151 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 PSPHP78330 225 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 SARNPP82979 210 aaKnown RBP0.61□□□□□ -2.31
VPS41-207ENST00000439468 TRIQKQ629K1 86 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 GLIPR1L1Q6UWM5 242 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 KRTAP19-3Q7Z4W3 81 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 NUP35Q8NFH5 326 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 BIN3Q9NQY0 253 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 NDUFAF1Q9Y375 327 aa0.61□□□□□ -2.31
VPS41-207ENST00000439468 TRDV1A0A1B0GX56 115 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 E5RI56 91 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 GPR31O00270 319 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 CST7O76096 145 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 HTN3P15516 51 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 VBP1P61758 197 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 DEFA5Q01523 94 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 MIR22HGQ0VDD5 57 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 DIAPH2-AS1Q14236 149 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 INSL4Q14641 139 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 VMA21Q3ZAQ7 101 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 OR2T2Q6IF00 324 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 SLC48A1Q6P1K1 146 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 SPINK6Q6UWN8 80 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 PHF5AQ7RTV0 110 aaKnown RBP0.6□□□□□ -2.31
VPS41-207ENST00000439468 CROCCP2Q86T23 111 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 PRR15Q8IV56 129 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 NIT2Q9NQR4 276 aa0.6□□□□□ -2.31
VPS41-207ENST00000439468 IQCF6A8MYZ5 107 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 GABARAPH6UMI1 98 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 FABP2P12104 132 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 DCUN1D2Q6PH85 259 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 FOXI2Q6ZQN5 318 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 OR9Q1Q8NGQ5 310 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 DYNLRB2Q8TF09 96 aa0.59□□□□□ -2.31
VPS41-207ENST00000439468 A0A096LPI6 279 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 A0A1W2PPM0 123 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 MAP1LC3B2A6NCE7 125 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 A6NN06 94 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 PPP5D1E7EU14 171 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 LYRM1O43325 122 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 IGLV3-1P01715 115 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 RBP4P02753 201 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 SPART-AS1P0CW21 52 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 LINC00575Q6W349 94 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 STX12Q86Y82 276 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 OR10AG1Q8NH19 301 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 NAT8BQ9UHF3 227 aa0.58□□□□□ -2.32
VPS41-207ENST00000439468 H3BQV1 296 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 KPNA4O00629 521 aaPredicted RBP0.57□□□□□ -2.32
VPS41-207ENST00000439468 PIPP12273 146 aaPredicted RBP0.57□□□□□ -2.32
VPS41-207ENST00000439468 CBLN1P23435 193 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 KDELR1P24390 212 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 TPPP2P59282 170 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 SPATA45Q537H7 98 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 HRCT1Q6UXD1 115 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 LINC00269Q8N2A0 174 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 TCTEX1D1Q8N7M0 179 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 OR4B1Q8NGF8 309 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 OR10AC1Q8NH08 325 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 CCDC115Q96NT0 180 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 TPRKBQ9Y3C4 175 aa0.57□□□□□ -2.32
VPS41-207ENST00000439468 OOSP1A8MZH6 123 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 FABP4P15090 132 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 S100A11P31949 105 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 POLR2HP52434 150 aaKnown RBP0.56□□□□□ -2.32
VPS41-207ENST00000439468 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 OCIAD2Q56VL3 154 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 TMEM78Q5T7P6 136 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 C4orf33Q8N1A6 199 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 EFCAB11Q9BUY7 163 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 CST11Q9H112 138 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 TMEM14BQ9NUH8 114 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 IL20Q9NYY1 176 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 NUBP2Q9Y5Y2 271 aa0.56□□□□□ -2.32
VPS41-207ENST00000439468 A0A096LPF7 62 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 A0A1W2PRE2 83 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 FABP1P07148 127 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 IFI6P09912 130 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 FXYD4P59646 89 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 NEDD8Q15843 81 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 COX6B2Q6YFQ2 88 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 COMMD6Q7Z4G1 85 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 Q86TA4 180 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 WFDC10BQ8IUB3 73 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 OR5H6Q8NGV6 325 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 CLEC2BQ92478 149 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 DIRC1Q969H9 104 aa0.55□□□□□ -2.32
VPS41-207ENST00000439468 FAM103A1Q9BTL3 118 aaKnown RBP0.55□□□□□ -2.32
VPS41-207ENST00000439468 A0A0J9YY99 117 aa0.54□□□□□ -2.32
VPS41-207ENST00000439468 TMEM189A5PLL7 270 aa0.54□□□□□ -2.32
VPS41-207ENST00000439468 C5orf58C9J3I9 102 aa0.54□□□□□ -2.32
VPS41-207ENST00000439468 MT1BP07438 61 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms