RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 CSDC2Q9Y534 153 aaKnown RBP4.26□□□□□ -1.73
ERCC8-203ENST00000439176 IGLV4-69A0A075B6H9 119 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 TCAPO15273 167 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
ERCC8-203ENST00000439176 GAGE2BQ13066 116 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 AMN1Q8IY45 258 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 CAMK2N2Q96S95 79 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 NAT8BQ9UHF3 227 aa4.25□□□□□ -1.73
ERCC8-203ENST00000439176 TRAV13-1A0A0B4J241 112 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 A0A1B0GW15 77 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 LINC00862A6NCI5 91 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 TRIAP1O43715 76 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 FAM74A3Q4VXF1 159 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 NUP35Q8NFH5 326 aa4.24□□□□□ -1.73
ERCC8-203ENST00000439176 F8WDY8 70 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 S100A8P05109 93 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 C2orf48Q96LS8 159 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 C20orf78Q9BR46 151 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
ERCC8-203ENST00000439176 F8W036 122 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 SMKR1H3BMG3 65 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 MT-ND6P03923 174 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 SRP19P09132 144 aaKnown RBP4.22□□□□□ -1.73
ERCC8-203ENST00000439176 CKS2P33552 79 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 RPL18AQ02543 176 aaKnown RBP4.22□□□□□ -1.73
ERCC8-203ENST00000439176 SPAG11BQ08648 103 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 ADIRFQ15847 76 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 FAM104BQ5XKR9 115 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 C5orf38Q86SI9 138 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 OR10D4PQ8NGN7 298 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 IMMP2LQ96T52 175 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 V9GYV3 84 aa4.22□□□□□ -1.73
ERCC8-203ENST00000439176 TRBV24-1A0A075B6N3 115 aa4.21□□□□□ -1.74
ERCC8-203ENST00000439176 RPL32P62910 135 aaKnown RBP4.21□□□□□ -1.74
ERCC8-203ENST00000439176 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.74
ERCC8-203ENST00000439176 PEA15Q15121 130 aa4.21□□□□□ -1.74
ERCC8-203ENST00000439176 MRPL51Q4U2R6 128 aaKnown RBP4.21□□□□□ -1.74
ERCC8-203ENST00000439176 C9orf116Q5BN46 136 aaPredicted RBP4.21□□□□□ -1.74
ERCC8-203ENST00000439176 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
ERCC8-203ENST00000439176 NRACQ8N912 160 aa4.21□□□□□ -1.74
ERCC8-203ENST00000439176 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
ERCC8-203ENST00000439176 NAT8Q9UHE5 227 aa4.21□□□□□ -1.74
ERCC8-203ENST00000439176 SMIM27A0A1W2PRY6 76 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.2□□□□□ -1.74
ERCC8-203ENST00000439176 NDUFA1O15239 70 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 PPBPP02775 128 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 RAB5AP20339 215 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 RPL23P62829 140 aaKnown RBP4.2□□□□□ -1.74
ERCC8-203ENST00000439176 HBBP68871 147 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 C1orf137Q5JT78 98 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 Q6ZUT4 128 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 ORAOV1Q8WV07 137 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 SMDT1Q9H4I9 107 aa4.2□□□□□ -1.74
ERCC8-203ENST00000439176 MRPL35Q9NZE8 188 aaKnown RBP4.2□□□□□ -1.74
ERCC8-203ENST00000439176 TNXBP22105 4242 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 TGIF2-C20orf24A0A0A6YYL0 155 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 A0A1W2PNN7 141 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 IFITM10A6NMD0 228 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
ERCC8-203ENST00000439176 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 MRPS36P82909 103 aaKnown RBP4.19□□□□□ -1.74
ERCC8-203ENST00000439176 DIRC1Q969H9 104 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 OPRPNQ99935 248 aaPredicted RBP4.19□□□□□ -1.74
ERCC8-203ENST00000439176 SMIM2Q9BVW6 85 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 PSORS1C2Q9UIG4 136 aa4.19□□□□□ -1.74
ERCC8-203ENST00000439176 A0A087WZ39 114 aa4.18□□□□□ -1.74
ERCC8-203ENST00000439176 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
ERCC8-203ENST00000439176 D6R8Y8 96 aa4.18□□□□□ -1.74
ERCC8-203ENST00000439176 RPL39P62891 51 aaKnown RBP4.18□□□□□ -1.74
ERCC8-203ENST00000439176 MRPL54Q6P161 138 aaKnown RBP4.18□□□□□ -1.74
ERCC8-203ENST00000439176 ORMDL3Q8N138 153 aa4.18□□□□□ -1.74
ERCC8-203ENST00000439176 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 GAGE2EQ4V326 116 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 Q6ZN92 141 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 TMEM136Q6ZRR5 245 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 PHF5AQ7RTV0 110 aaKnown RBP4.17□□□□□ -1.74
ERCC8-203ENST00000439176 ATP5L2Q7Z4Y8 100 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 PACRGQ96M98 296 aaPredicted RBP4.17□□□□□ -1.74
ERCC8-203ENST00000439176 C2orf88Q9BSF0 95 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 GAGE2DQ9UEU5 116 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 LRP2P98164 4655 aa4.17□□□□□ -1.74
ERCC8-203ENST00000439176 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 NPYP01303 97 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 PRSS2P07478 247 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 UBE2BP63146 152 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 UNQ6190/PRO20217Q6UXQ8 127 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 TEX43Q6ZNM6 134 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 TMEM141Q96I45 108 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 PRELID3AQ96N28 172 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 LAMTOR2Q9Y2Q5 125 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 PYGO1Q9Y3Y4 419 aa4.16□□□□□ -1.74
ERCC8-203ENST00000439176 A0A1B0GXF2 115 aa4.15□□□□□ -1.75
ERCC8-203ENST00000439176 C9JQL5 133 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms