RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
TCOF1-205ENST00000439160 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
TCOF1-205ENST00000439160 ATRQ13535 2644 aa8.94□□□□□ -0.98
TCOF1-205ENST00000439160 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
TCOF1-205ENST00000439160 ITPR3Q14573 2671 aa8.93□□□□□ -0.98
TCOF1-205ENST00000439160 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
TCOF1-205ENST00000439160 TCL1BO95988 128 aa8.92□□□□□ -0.98
TCOF1-205ENST00000439160 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
TCOF1-205ENST00000439160 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
TCOF1-205ENST00000439160 LAMA1P25391 3075 aa8.92□□□□□ -0.98
TCOF1-205ENST00000439160 PIK3CD-AS1Q5SR53 167 aa8.92□□□□□ -0.98
TCOF1-205ENST00000439160 SPANXB1Q9NS25 103 aaPredicted RBP8.92□□□□□ -0.98
TCOF1-205ENST00000439160 MAST4O15021 2626 aa8.91□□□□□ -0.98
TCOF1-205ENST00000439160 H7C423 109 aa8.91□□□□□ -0.98
TCOF1-205ENST00000439160 TIRAPP58753 221 aa8.91□□□□□ -0.98
TCOF1-205ENST00000439160 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 C16orf95Q9H693 158 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 SPANXCQ9NY87 97 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 UBE2D3P61077 147 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 UBE2D2P62837 147 aa8.9□□□□□ -0.98
TCOF1-205ENST00000439160 KLK5Q9Y337 293 aaPredicted RBP8.9□□□□□ -0.98
TCOF1-205ENST00000439160 MUC4Q99102 2169 aa8.9□□□□□ -0.99
TCOF1-205ENST00000439160 KPRPQ5T749 579 aaPredicted RBP8.9□□□□□ -0.99
TCOF1-205ENST00000439160 MT-ATP8P03928 68 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 CDK2AP2O75956 126 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 A0A096LNJ9 63 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 IGKV2-24A0A0C4DH68 120 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 CLUHP3Q96NS8 147 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
TCOF1-205ENST00000439160 COL27A1Q8IZC6 1860 aaPredicted RBP8.88□□□□□ -0.99
TCOF1-205ENST00000439160 AKAP13Q12802 2813 aa8.88□□□□□ -0.99
TCOF1-205ENST00000439160 A0A0B4J2C4 111 aa8.87□□□□□ -0.99
TCOF1-205ENST00000439160 RETNQ9HD89 108 aa8.87□□□□□ -0.99
TCOF1-205ENST00000439160 TRBV10-2A0A0K0K1G8 114 aa8.87□□□□□ -0.99
TCOF1-205ENST00000439160 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
TCOF1-205ENST00000439160 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
TCOF1-205ENST00000439160 UBE2D1P51668 147 aa8.86□□□□□ -0.99
TCOF1-205ENST00000439160 Q6ZSN1 163 aa8.86□□□□□ -0.99
TCOF1-205ENST00000439160 DIRC1Q969H9 104 aa8.86□□□□□ -0.99
TCOF1-205ENST00000439160 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
TCOF1-205ENST00000439160 SMIM20Q8N5G0 67 aa8.85□□□□□ -0.99
TCOF1-205ENST00000439160 IBA57-AS1B1ANH7 110 aa8.85□□□□□ -0.99
TCOF1-205ENST00000439160 NANOS2P60321 138 aaKnown RBP8.85□□□□□ -0.99
TCOF1-205ENST00000439160 Q8N2B8 174 aa8.85□□□□□ -0.99
TCOF1-205ENST00000439160 MRPS36P82909 103 aaKnown RBP8.85□□□□□ -0.99
TCOF1-205ENST00000439160 RNF183Q96D59 192 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 A0A0J9YWU9 116 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 TEX49A0A1B0GTD5 131 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 LINC00694P0DN24 101 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 TRAV10A0A0B4J240 114 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 LINC00242Q5T6M2 205 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 LELP1Q5T871 98 aa8.84□□□□□ -0.99
TCOF1-205ENST00000439160 H3BT86 120 aa8.84□□□□□ -1
TCOF1-205ENST00000439160 CD164L2Q6UWJ8 174 aa8.84□□□□□ -1
TCOF1-205ENST00000439160 IGLV2-18A0A075B6J9 118 aa8.83□□□□□ -1
TCOF1-205ENST00000439160 RBMY1FQ15415 496 aaKnown RBP8.83□□□□□ -1
TCOF1-205ENST00000439160 POM121L12Q8N7R1 296 aa8.83□□□□□ -1
TCOF1-205ENST00000439160 TRIAP1O43715 76 aa8.82□□□□□ -1
TCOF1-205ENST00000439160 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
TCOF1-205ENST00000439160 hADV29S1A0JD25 119 aa8.82□□□□□ -1
TCOF1-205ENST00000439160 FAM236AA0A1B0GUQ0 79 aa8.82□□□□□ -1
TCOF1-205ENST00000439160 FAM236BA0A1B0GV22 79 aa8.82□□□□□ -1
TCOF1-205ENST00000439160 FHL2Q14192 279 aa8.81□□□□□ -1
TCOF1-205ENST00000439160 IGLV4-69A0A075B6H9 119 aa8.81□□□□□ -1
TCOF1-205ENST00000439160 BEAN1Q3B7T3 259 aa8.81□□□□□ -1
TCOF1-205ENST00000439160 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
TCOF1-205ENST00000439160 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.81□□□□□ -1
TCOF1-205ENST00000439160 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
TCOF1-205ENST00000439160 KIF25-AS1Q9Y6Z4 181 aa8.8□□□□□ -1
TCOF1-205ENST00000439160 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
TCOF1-205ENST00000439160 SYCNQ0VAF6 134 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 TRACP01848 142 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 ACYP1P07311 99 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 COX7BP24311 80 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 UBE2AP49459 152 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 IL17DQ8TAD2 202 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 SLPIP03973 132 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 Q6ZTC4 211 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 C14orf132Q9NPU4 83 aa8.79□□□□□ -1
TCOF1-205ENST00000439160 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
TCOF1-205ENST00000439160 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
TCOF1-205ENST00000439160 SPANXDQ9BXN6 97 aa8.78□□□□□ -1
TCOF1-205ENST00000439160 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
TCOF1-205ENST00000439160 JMJD7-PLA2G4BH0Y9G9 81 aa8.77□□□□□ -1
TCOF1-205ENST00000439160 COX6A2Q02221 97 aa8.77□□□□□ -1
TCOF1-205ENST00000439160 C6orf99Q4VX62 202 aa8.77□□□□□ -1
TCOF1-205ENST00000439160 RBM3P98179 157 aaKnown RBP8.77□□□□□ -1.01
TCOF1-205ENST00000439160 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
TCOF1-205ENST00000439160 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
TCOF1-205ENST00000439160 TMEM256-PLSCR3K7ERE1 68 aa8.77□□□□□ -1.01
TCOF1-205ENST00000439160 TIMM17BO60830 172 aa8.77□□□□□ -1.01
TCOF1-205ENST00000439160 C11orf72Q8NBR9 251 aa8.76□□□□□ -1.01
TCOF1-205ENST00000439160 FSHBP01225 129 aa8.76□□□□□ -1.01
TCOF1-205ENST00000439160 XGP55808 180 aa8.76□□□□□ -1.01
TCOF1-205ENST00000439160 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
TCOF1-205ENST00000439160 FHL3Q13643 280 aa8.76□□□□□ -1.01
TCOF1-205ENST00000439160 LINC00315P59091 139 aa8.75□□□□□ -1.01
TCOF1-205ENST00000439160 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms