RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DEFB4AO15263 64 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 COX6A2Q02221 97 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 BEAN1Q3B7T3 259 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 SLPIP03973 132 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 LINC00694P0DN24 101 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 RBM3P98179 157 aaKnown RBP4.83□□□□□ -1.64
CSDE1-205ENST00000438362 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 LINC00269Q8N2A0 174 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 WFDC11Q8NEX6 87 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
CSDE1-205ENST00000438362 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 KLK12Q9UKR0 248 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 WFDC10AQ9H1F0 79 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 CSDC2Q9Y534 153 aaKnown RBP4.82□□□□□ -1.64
CSDE1-205ENST00000438362 J3QKU1 62 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 C1orf158Q8N1D5 194 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 SMIM11BQ8TCY0 68 aa4.82□□□□□ -1.64
CSDE1-205ENST00000438362 WDFY4Q6ZS81 3184 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 J3KT08 172 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 JMJD1CQ15652 2540 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 SMIM9A6NGZ8 99 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 H3BQ85 93 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 CCL18P55774 89 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 REG3AQ06141 175 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-205ENST00000438362 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 ZNF462Q96JM2 2506 aa4.81□□□□□ -1.64
CSDE1-205ENST00000438362 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
CSDE1-205ENST00000438362 LINC00959A0A1B0GUT2 108 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 F8WEM9 126 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
CSDE1-205ENST00000438362 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 C1orf43Q9BWL3 253 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 IGKV2D-24A0A075B6R9 120 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 SBSPONQ8IVN8 264 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 LINC01006Q8NI28 216 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 VCANP13611 3396 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 LYRM9A8MSI8 78 aa4.8□□□□□ -1.64
CSDE1-205ENST00000438362 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
CSDE1-205ENST00000438362 MUC4Q99102 2169 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 MGAQ8IWI9 3026 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 PDE6GP18545 87 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 C6orf99Q4VX62 202 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 C11orf72Q8NBR9 251 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 BBC3Q96PG8 261 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-205ENST00000438362 TRAV23DV6A0A075B6W5 121 aa4.79□□□□□ -1.64
CSDE1-205ENST00000438362 ATP5EP2Q5VTU8 51 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 IGLV5-39A0A0G2JS06 123 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 CD164L2Q6UWJ8 174 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 Q9UF83 564 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 IGLV4-60A0A075B6I1 120 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 A0A087WZ39 114 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 KRTAP10-9P60411 292 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 DEFB105AQ8NG35 78 aa4.78□□□□□ -1.64
CSDE1-205ENST00000438362 ACANP16112 2415 aa4.78□□□□□ -1.65
CSDE1-205ENST00000438362 Q8IZM0 81 aa4.77□□□□□ -1.65
CSDE1-205ENST00000438362 COX7CP15954 63 aa4.77□□□□□ -1.65
CSDE1-205ENST00000438362 COX7BP24311 80 aa4.77□□□□□ -1.65
CSDE1-205ENST00000438362 UPK3BQ9BT76 320 aa4.77□□□□□ -1.65
CSDE1-205ENST00000438362 ZNF575Q86XF7 245 aa4.77□□□□□ -1.65
CSDE1-205ENST00000438362 USP17L23D6RBM5 183 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 NREPQ16612 68 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 IGLV5-45A0A087WSX0 123 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 FUSP35637 526 aaKnown RBP eCLIP4.76□□□□□ -1.652e-9■□□□□ 9
CSDE1-205ENST00000438362 DEFB121Q5J5C9 76 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 ENHOQ6UWT2 76 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 ZNF843Q8N446 348 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 PSCAO43653 123 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 IGLV1-51P01701 117 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 C20orf197Q8N268 126 aa4.76□□□□□ -1.65
CSDE1-205ENST00000438362 DSPP15924 2871 aaKnown RBP4.76□□□□□ -1.65
CSDE1-205ENST00000438362 Q6JHZ5 121 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 RMI2Q96E14 147 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 A0A087WYN8 130 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 ETDCA0A1B0GVM5 59 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 FHL2Q14192 279 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 HIGD2BQ4VC39 106 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 CELSR3Q9NYQ7 3312 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 LINC00337Q8N6G1 96 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 COX17Q14061 63 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 Q8N2B8 174 aa4.75□□□□□ -1.65
CSDE1-205ENST00000438362 LITAFQ99732 161 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 NBEAQ8NFP9 2946 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 TRBV7-7A0A0K0K1E9 115 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 MIFP14174 115 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 Q6ZQY7 126 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 KIR2DL5BQ8NHK3 375 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 LINC00526Q96FQ7 95 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 SHISA2Q6UWI4 295 aa4.74□□□□□ -1.65
CSDE1-205ENST00000438362 SOSTDC1Q6X4U4 206 aa4.73□□□□□ -1.65
CSDE1-205ENST00000438362 IGHV4-28A0A0C4DH34 117 aa4.73□□□□□ -1.65
CSDE1-205ENST00000438362 HILS1P60008 231 aa4.73□□□□□ -1.65
CSDE1-205ENST00000438362 UBE2BP63146 152 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms