RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 CEP290O15078 2479 aa2.59□□□□□ -2
PTPN12-206ENST00000435495 TRBV6-7A0A0A0MS04 114 aa2.59□□□□□ -2
PTPN12-206ENST00000435495 TRBV6-8A0A0A6YYG3 113 aa2.59□□□□□ -2
PTPN12-206ENST00000435495 HCRTO43612 131 aa2.59□□□□□ -2
PTPN12-206ENST00000435495 UBE2D4Q9Y2X8 147 aa2.59□□□□□ -2
PTPN12-206ENST00000435495 MED12Q93074 2177 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 A0A0C4DFX4 3053 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 GBF1Q92538 1859 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 PDE6HQ13956 83 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 COL6A3P12111 3177 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 CR1P17927 2039 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 LEPROTL1O95214 131 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 LYPD1Q8N2G4 141 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 DEFB123Q8N688 67 aa2.58□□□□□ -2
PTPN12-206ENST00000435495 LAMA3Q16787 3333 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 IGKV3-7A0A075B6H7 116 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 NUPR2A6NF83 97 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 ARMS2P0C7Q2 107 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 IFI27P40305 119 aaPredicted RBP2.57□□□□□ -2
PTPN12-206ENST00000435495 C1orf137Q5JT78 98 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 GDF5OSQ5U4N7 250 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 FDCSPQ8NFU4 85 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 A0A0D9SFI3 127 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 CYYR1Q96J86 154 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 HIGD2AQ9BW72 106 aa2.57□□□□□ -2
PTPN12-206ENST00000435495 COL27A1Q8IZC6 1860 aaPredicted RBP2.56□□□□□ -2
PTPN12-206ENST00000435495 PPP1R17O96001 155 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 DMAC1Q96GE9 116 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 SNURFQ9Y675 71 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 PPP1R1CQ8WVI7 109 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 PRR15LQ9BU68 103 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 PRO2289Q9P1D8 64 aa2.56□□□□□ -2
PTPN12-206ENST00000435495 SDK1Q7Z5N4 2213 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 D6R8Y8 96 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 IGKV1-17P01599 117 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 SAA2P0DJI9 122 aaPredicted RBP2.55□□□□□ -2
PTPN12-206ENST00000435495 SPAG11BQ08648 103 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 MUSTN1Q8IVN3 82 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 Q9BRP9 147 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 LOC285556D6RIA3 1793 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 UNC80Q8N2C7 3258 aa2.55□□□□□ -2
PTPN12-206ENST00000435495 M0R3E3 92 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 CTSGP08311 255 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 ELOF1P60002 83 aaKnown RBP2.54□□□□□ -2
PTPN12-206ENST00000435495 ZNF236Q9UL36 1845 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 DDX60LQ5H9U9 1706 aaKnown RBP2.54□□□□□ -2
PTPN12-206ENST00000435495 LAMA2P24043 3122 aaKnown RBP2.54□□□□□ -2
PTPN12-206ENST00000435495 HIGD1CA8MV81 97 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 ORMDL1Q9P0S3 153 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 DNAH12Q6ZR08 3092 aa2.54□□□□□ -2
PTPN12-206ENST00000435495 LRCOL1A6NCL2 159 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 LENEPQ9Y5L5 61 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 A0A0J9YY99 117 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 IGHV3-30P01768 117 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 IGHV3-30-5P0DP03 117 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 DOCK10Q96BY6 2186 aa2.53□□□□□ -2
PTPN12-206ENST00000435495 SHROOM3Q8TF72 1996 aa2.53□□□□□ -2.01
PTPN12-206ENST00000435495 PLXNB2O15031 1838 aa2.53□□□□□ -2.01
PTPN12-206ENST00000435495 SSBP1Q04837 148 aaKnown RBP2.52□□□□□ -2.01
PTPN12-206ENST00000435495 NCBP2-AS2Q69YL0 99 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 Q6ZTI0 123 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 PATE1Q8WXA2 126 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 KIF25-AS1Q9Y6Z4 181 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 EYSQ5T1H1 3165 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 VCANP13611 3396 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 IGKV3-15P01624 115 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 DEFB107AQ8IZN7 70 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 TSC2P49815 1807 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 SEC16AO15027 2179 aa2.52□□□□□ -2.01
PTPN12-206ENST00000435495 A0A087WVE0 104 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 ATXN8Q156A1 80 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 TTTY12Q9BZ98 90 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 CCL26Q9Y258 94 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 PRUNE2Q8WUY3 3088 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 SPTBN5Q9NRC6 3674 aaKnown RBP2.51□□□□□ -2.01
PTPN12-206ENST00000435495 IGLV3-1P01715 115 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 HRES1P13985 223 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 ATP5EP2Q5VTU8 51 aa2.51□□□□□ -2.01
PTPN12-206ENST00000435495 IGKV3D-7A0A0C4DH55 119 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 IGKV3OR2-268A0A0C4DH90 116 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 A0A0G2JQZ4 141 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 TRBV7-4A0A0J9YYF1 115 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 HMGA1P17096 107 aaKnown RBP2.5□□□□□ -2.01
PTPN12-206ENST00000435495 SHANK1Q9Y566 2161 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 TRBV6-5A0A0K0K1A5 114 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 CCL3L1P16619 93 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 KRTAP11-1Q8IUC1 163 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 TOMM5Q8N4H5 51 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 COX7B2Q8TF08 81 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 CDH23Q9H251 3354 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 PCDH15Q96QU1 1955 aa2.5□□□□□ -2.01
PTPN12-206ENST00000435495 INTS1Q8N201 2190 aaKnown RBP2.5□□□□□ -2.01
PTPN12-206ENST00000435495 ANKRD36A6QL64 1941 aa2.49□□□□□ -2.01
PTPN12-206ENST00000435495 RP1L1Q8IWN7 2480 aaPredicted RBP2.49□□□□□ -2.01
PTPN12-206ENST00000435495 A0A0G2JMZ2 1700 aa2.49□□□□□ -2.01
PTPN12-206ENST00000435495 MUC3AQ02505 3323 aa2.49□□□□□ -2.01
PTPN12-206ENST00000435495 LINC01549A6NIU2 74 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms