RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 CARD19Q96LW7 228 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
HDAC6-207ENST00000430858 CYSLTR1Q9Y271 337 aa6.25□□□□□ -1.41
HDAC6-207ENST00000430858 IGLV4-69A0A075B6H9 119 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 NPSP0C0P6 89 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 G0S2P27469 103 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
HDAC6-207ENST00000430858 RPL37AP61513 92 aaKnown RBP6.24□□□□□ -1.41
HDAC6-207ENST00000430858 COX19Q49B96 90 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 C2orf66Q6UXQ4 117 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 LINC00474Q9P2X8 69 aa6.24□□□□□ -1.41
HDAC6-207ENST00000430858 IGKV2-24A0A0C4DH68 120 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 MAJINQ3KP22 176 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 KIAA1644Q3SXP7 199 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 Q6ZN92 141 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 TEX43Q6ZNM6 134 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 OR10D4PQ8NGN7 298 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 C2orf48Q96LS8 159 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 CAMK2N2Q96S95 79 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 RPS10P5Q9NQ39 176 aa6.23□□□□□ -1.41
HDAC6-207ENST00000430858 A0A096LNI7 61 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 MT-ND6P03923 174 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 Q6ZRU5 148 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 C2orf88Q9BSF0 95 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
HDAC6-207ENST00000430858 IGIPA6NJ69 53 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 F8WDY8 70 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 UBE2D1P51668 147 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 LINC00242Q5T6M2 205 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 STPG4Q8N801 248 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 ORAOV1Q8WV07 137 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 AMELXQ99217 191 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 VCX2Q9H322 139 aa6.21□□□□□ -1.42
HDAC6-207ENST00000430858 FLG2Q5D862 2391 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-207ENST00000430858 A0A087WZ39 114 aa6.2□□□□□ -1.42
HDAC6-207ENST00000430858 LOC107984640A0A0U1RRK4 108 aa6.2□□□□□ -1.42
HDAC6-207ENST00000430858 SMCPP49901 116 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-207ENST00000430858 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
HDAC6-207ENST00000430858 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
HDAC6-207ENST00000430858 TIMM17AQ99595 171 aa6.2□□□□□ -1.42
HDAC6-207ENST00000430858 ALKBH7Q9BT30 221 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-207ENST00000430858 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
HDAC6-207ENST00000430858 LINC01546A6NGU7 62 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 LINC01549A6NIU2 74 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-207ENST00000430858 SNAPINO95295 136 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 APOC3P02656 99 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 PTTG1IPP53801 180 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 FABP9Q0Z7S8 132 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 RNF151Q2KHN1 245 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 LINC00173Q6ZV60 143 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 LINC01561Q8N1V8 128 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 SVBPQ8N300 66 aa6.19□□□□□ -1.42
HDAC6-207ENST00000430858 MRPL35Q9NZE8 188 aaKnown RBP6.19□□□□□ -1.42
HDAC6-207ENST00000430858 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.18□□□□□ -1.42
HDAC6-207ENST00000430858 NDUFA1O15239 70 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 SEC11AP67812 179 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 ERASQ7Z444 233 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 FAM19A3Q7Z5A8 133 aa6.18□□□□□ -1.42
HDAC6-207ENST00000430858 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
HDAC6-207ENST00000430858 FA2HQ7L5A8 372 aa6.17□□□□□ -1.42
HDAC6-207ENST00000430858 SCGB3A1Q96QR1 104 aa6.17□□□□□ -1.42
HDAC6-207ENST00000430858 TRAPPC1Q9Y5R8 145 aa6.17□□□□□ -1.42
HDAC6-207ENST00000430858 OXTP01178 125 aa6.16□□□□□ -1.42
HDAC6-207ENST00000430858 HERVK_113P63121 156 aa6.16□□□□□ -1.42
HDAC6-207ENST00000430858 RPL18AQ02543 176 aaKnown RBP6.16□□□□□ -1.42
HDAC6-207ENST00000430858 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
HDAC6-207ENST00000430858 SMCO4Q9NRQ5 59 aa6.16□□□□□ -1.42
HDAC6-207ENST00000430858 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
HDAC6-207ENST00000430858 A0A0J9YXV3 536 aa6.15□□□□□ -1.42
HDAC6-207ENST00000430858 TLX1NBP0CAT3 122 aa6.15□□□□□ -1.42
HDAC6-207ENST00000430858 HNRNPA3P51991 378 aaKnown RBP6.15□□□□□ -1.42
HDAC6-207ENST00000430858 C10orf25Q5T742 122 aa6.15□□□□□ -1.42
HDAC6-207ENST00000430858 UNQ6190/PRO20217Q6UXQ8 127 aa6.15□□□□□ -1.42
HDAC6-207ENST00000430858 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
HDAC6-207ENST00000430858 C6orf48Q9UBA6 75 aa6.15□□□□□ -1.42
HDAC6-207ENST00000430858 TRBV30A0A0K0K1B3 111 aa6.14□□□□□ -1.43
HDAC6-207ENST00000430858 PRSS2P07478 247 aa6.14□□□□□ -1.43
HDAC6-207ENST00000430858 C9orf116Q5BN46 136 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-207ENST00000430858 PACRGQ96M98 296 aaPredicted RBP6.14□□□□□ -1.43
HDAC6-207ENST00000430858 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-207ENST00000430858 A0A1W2PNN7 141 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 LINC00614P0C842 121 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 PRR3P79522 188 aaKnown RBP6.13□□□□□ -1.43
HDAC6-207ENST00000430858 Q6ZRP5 223 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 Q8IZM0 81 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 C18orf32Q8TCD1 76 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 CST9LQ9H4G1 147 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 CDKN2A-AS1Q9UH64 79 aa6.13□□□□□ -1.43
HDAC6-207ENST00000430858 TINCRA0A1B0GVN0 87 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms