RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GDF5OSQ5U4N7 250 aa12.26□□□□□ -0.45
RIF1-204ENST00000430328 TRBV6-4A0A1B0GX49 114 aa12.26□□□□□ -0.45
RIF1-204ENST00000430328 RETNLBQ9BQ08 111 aa12.25□□□□□ -0.45
RIF1-204ENST00000430328 RAI1Q7Z5J4 1906 aaPredicted RBP12.24□□□□□ -0.45
RIF1-204ENST00000430328 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
RIF1-204ENST00000430328 E7EUB6 86 aa12.24□□□□□ -0.45
RIF1-204ENST00000430328 ACACBO00763 2458 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 MYO9AB2RTY4 2548 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 SPRNQ5BIV9 151 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 C8orf87E5RJ46 101 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 NRGNQ92686 78 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 PRLHP81277 87 aa12.23□□□□□ -0.45
RIF1-204ENST00000430328 ZFP36P26651 326 aaKnown RBP12.22□□□□□ -0.45
RIF1-204ENST00000430328 PRORYQ9H606 182 aa12.22□□□□□ -0.45
RIF1-204ENST00000430328 U3KQK5 164 aa12.22□□□□□ -0.45
RIF1-204ENST00000430328 C2orf91Q6ZV80 131 aa12.22□□□□□ -0.45
RIF1-204ENST00000430328 Q8N814 137 aa12.22□□□□□ -0.45
RIF1-204ENST00000430328 Q8N6K4 173 aa12.21□□□□□ -0.45
RIF1-204ENST00000430328 ANKHD1Q8IWZ3 2542 aaKnown RBP12.21□□□□□ -0.45
RIF1-204ENST00000430328 ZNF843Q8N446 348 aa12.21□□□□□ -0.45
RIF1-204ENST00000430328 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
RIF1-204ENST00000430328 HIVEP3Q5T1R4 2406 aa12.2□□□□□ -0.46
RIF1-204ENST00000430328 ACANP16112 2415 aa12.2□□□□□ -0.46
RIF1-204ENST00000430328 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
RIF1-204ENST00000430328 LINC00575Q6W349 94 aa12.19□□□□□ -0.46
RIF1-204ENST00000430328 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
RIF1-204ENST00000430328 A0A087WVE0 104 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 C7orf65Q6ZTY9 151 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 TRBV10-3A0A0K0K1G6 114 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 IGLV2-18A0A075B6J9 118 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 TNFRSF13BO14836 293 aaPredicted RBP12.18□□□□□ -0.46
RIF1-204ENST00000430328 REG3GQ6UW15 175 aa12.18□□□□□ -0.46
RIF1-204ENST00000430328 LELP1Q5T871 98 aa12.17□□□□□ -0.46
RIF1-204ENST00000430328 DAZAP2Q15038 168 aaPredicted RBP12.17□□□□□ -0.46
RIF1-204ENST00000430328 Q8IZM0 81 aa12.17□□□□□ -0.46
RIF1-204ENST00000430328 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
RIF1-204ENST00000430328 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 LINC00959A0A1B0GUT2 108 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 Q6ZSR3 168 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 K7EQG2 157 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 IGLV1-47P01700 117 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 HCG22E2RYF7 251 aa12.16□□□□□ -0.46
RIF1-204ENST00000430328 KPRPQ5T749 579 aaPredicted RBP12.15□□□□□ -0.46
RIF1-204ENST00000430328 IGF2-ASQ6U949 168 aa12.15□□□□□ -0.46
RIF1-204ENST00000430328 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
RIF1-204ENST00000430328 Q6ZS46 218 aa12.15□□□□□ -0.46
RIF1-204ENST00000430328 TSHBP01222 138 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 IGLV2-14P01704 120 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 M0R2N4 97 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 ACYP2P14621 99 aa12.14□□□□□ -0.47
RIF1-204ENST00000430328 PROK1P58294 105 aa12.13□□□□□ -0.47
RIF1-204ENST00000430328 C1orf64Q8NEQ6 169 aa12.13□□□□□ -0.47
RIF1-204ENST00000430328 BBC3Q96PG8 261 aaPredicted RBP12.13□□□□□ -0.47
RIF1-204ENST00000430328 Q8N7P7 452 aa12.13□□□□□ -0.47
RIF1-204ENST00000430328 CRIP2P52943 208 aaPredicted RBP12.12□□□□□ -0.47
RIF1-204ENST00000430328 ATP11AUNQ6ZP68 121 aa12.11□□□□□ -0.47
RIF1-204ENST00000430328 KRTAP27-1Q3LI81 207 aa12.11□□□□□ -0.47
RIF1-204ENST00000430328 COL5A1P20908 1838 aaPredicted RBP12.1□□□□□ -0.47
RIF1-204ENST00000430328 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
RIF1-204ENST00000430328 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
RIF1-204ENST00000430328 ZNF702PQ9H963 129 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 IGKV2D-30A0A075B6S6 120 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 IGKV2-30P06310 120 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 CRIP1P50238 77 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 Q9BRP9 147 aa12.09□□□□□ -0.47
RIF1-204ENST00000430328 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
RIF1-204ENST00000430328 Q6ZTC4 211 aa12.07□□□□□ -0.48
RIF1-204ENST00000430328 A0A087WYN8 130 aa12.07□□□□□ -0.48
RIF1-204ENST00000430328 MUC6Q6W4X9 2439 aa12.06□□□□□ -0.48
RIF1-204ENST00000430328 EIF4EBP1Q13541 118 aaPredicted RBP12.06□□□□□ -0.48
RIF1-204ENST00000430328 Q9UF83 564 aa12.06□□□□□ -0.48
RIF1-204ENST00000430328 LY6G6CO95867 125 aa12.06□□□□□ -0.48
RIF1-204ENST00000430328 DEFB116Q30KQ4 102 aa12.05□□□□□ -0.48
RIF1-204ENST00000430328 A0A087WSZ3 146 aa12.05□□□□□ -0.48
RIF1-204ENST00000430328 ODF3BA8MYP8 253 aa12.04□□□□□ -0.48
RIF1-204ENST00000430328 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
RIF1-204ENST00000430328 CDC42SE2Q9NRR3 84 aa12.03□□□□□ -0.48
RIF1-204ENST00000430328 SSBP3-AS1Q7Z2R9 100 aa12.03□□□□□ -0.48
RIF1-204ENST00000430328 EGFEM1PQ0D2K5 195 aa12.03□□□□□ -0.48
RIF1-204ENST00000430328 C4orf26Q17RF5 130 aa12.02□□□□□ -0.48
RIF1-204ENST00000430328 NUPR2A6NF83 97 aa12.02□□□□□ -0.48
RIF1-204ENST00000430328 C11orf1Q9H5F2 150 aa12.02□□□□□ -0.49
RIF1-204ENST00000430328 TP53AIP1Q9HCN2 124 aa12.02□□□□□ -0.49
RIF1-204ENST00000430328 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
RIF1-204ENST00000430328 FSHBP01225 129 aa12□□□□□ -0.49
RIF1-204ENST00000430328 LRRK2Q5S007 2527 aa12□□□□□ -0.49
RIF1-204ENST00000430328 PRM2P04554 102 aa12□□□□□ -0.49
RIF1-204ENST00000430328 U3KQA8 63 aa12□□□□□ -0.49
RIF1-204ENST00000430328 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
RIF1-204ENST00000430328 UNQ6190/PRO20217Q6UXQ8 127 aa11.99□□□□□ -0.49
RIF1-204ENST00000430328 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
RIF1-204ENST00000430328 C2orf48Q96LS8 159 aa11.99□□□□□ -0.49
RIF1-204ENST00000430328 ZFYVE26Q68DK2 2539 aa11.98□□□□□ -0.49
RIF1-204ENST00000430328 COL4A5P29400 1685 aa11.98□□□□□ -0.49
RIF1-204ENST00000430328 C6orf223Q8N319 242 aa11.98□□□□□ -0.49
RIF1-204ENST00000430328 POLR2KP53803 58 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms