RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 A8MZ25 164 aa12.28□□□□□ -0.44
SMARCA4-203ENST00000429416 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
SMARCA4-203ENST00000429416 PPDPFLQ8WWR9 84 aa12.28□□□□□ -0.44
SMARCA4-203ENST00000429416 PIK3CD-AS1Q5SR53 167 aa12.27□□□□□ -0.44
SMARCA4-203ENST00000429416 UBE2D4Q9Y2X8 147 aa12.27□□□□□ -0.44
SMARCA4-203ENST00000429416 FXYD2P54710 66 aa12.27□□□□□ -0.45
SMARCA4-203ENST00000429416 CHD9Q3L8U1 2897 aa12.27□□□□□ -0.45
SMARCA4-203ENST00000429416 IBA57-AS1B1ANH7 110 aa12.27□□□□□ -0.45
SMARCA4-203ENST00000429416 GAS8-AS1O95177 125 aa12.27□□□□□ -0.45
SMARCA4-203ENST00000429416 BRCA2P51587 3418 aa12.27□□□□□ -0.45
SMARCA4-203ENST00000429416 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 NRACQ8N912 160 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 SBSPONQ8IVN8 264 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 PYGO1Q9Y3Y4 419 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 MAST4O15021 2626 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 CDPF1Q6NVV7 123 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 PPDPFQ9H3Y8 114 aa12.26□□□□□ -0.45
SMARCA4-203ENST00000429416 K7EP34 96 aa12.25□□□□□ -0.45
SMARCA4-203ENST00000429416 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
SMARCA4-203ENST00000429416 CLEC2BQ92478 149 aa12.25□□□□□ -0.45
SMARCA4-203ENST00000429416 NREPQ16612 68 aa12.25□□□□□ -0.45
SMARCA4-203ENST00000429416 F8W1H4 67 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 TMEM223A0PJW6 202 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 RPL37AP8A6NKH3 93 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 CENPEQ02224 2701 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 CFAP46Q8IYW2 2715 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 WFDC10BQ8IUB3 73 aa12.24□□□□□ -0.45
SMARCA4-203ENST00000429416 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
SMARCA4-203ENST00000429416 H0Y9J4 135 aa12.23□□□□□ -0.45
SMARCA4-203ENST00000429416 LINC00474Q9P2X8 69 aa12.23□□□□□ -0.45
SMARCA4-203ENST00000429416 NPSP0C0P6 89 aa12.22□□□□□ -0.45
SMARCA4-203ENST00000429416 CDC42SE2Q9NRR3 84 aa12.22□□□□□ -0.45
SMARCA4-203ENST00000429416 ATRQ13535 2644 aa12.22□□□□□ -0.45
SMARCA4-203ENST00000429416 MDFIQ99750 246 aa12.21□□□□□ -0.45
SMARCA4-203ENST00000429416 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
SMARCA4-203ENST00000429416 CYSRT1A8MQ03 144 aa12.21□□□□□ -0.45
SMARCA4-203ENST00000429416 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 FSHBP01225 129 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 SPANXDQ9BXN6 97 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 HIGD1BQ9P298 99 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 H3BQ85 93 aa12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 RBM3P98179 157 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-203ENST00000429416 AGRNO00468 2067 aa12.19□□□□□ -0.46
SMARCA4-203ENST00000429416 IGLV4-60A0A075B6I1 120 aa12.19□□□□□ -0.46
SMARCA4-203ENST00000429416 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
SMARCA4-203ENST00000429416 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-203ENST00000429416 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-203ENST00000429416 SPATA12Q7Z6I5 190 aa12.18□□□□□ -0.46
SMARCA4-203ENST00000429416 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
SMARCA4-203ENST00000429416 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
SMARCA4-203ENST00000429416 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
SMARCA4-203ENST00000429416 TMEM256-PLSCR3K7ERE1 68 aa12.17□□□□□ -0.46
SMARCA4-203ENST00000429416 UNQ6190/PRO20217Q6UXQ8 127 aa12.16□□□□□ -0.46
SMARCA4-203ENST00000429416 C6orf223Q8N319 242 aa12.16□□□□□ -0.46
SMARCA4-203ENST00000429416 K7EP13 123 aa12.16□□□□□ -0.46
SMARCA4-203ENST00000429416 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
SMARCA4-203ENST00000429416 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
SMARCA4-203ENST00000429416 Q6ZSN1 163 aa12.15□□□□□ -0.46
SMARCA4-203ENST00000429416 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
SMARCA4-203ENST00000429416 JMJD7-PLA2G4BH0Y9G9 81 aa12.15□□□□□ -0.47
SMARCA4-203ENST00000429416 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
SMARCA4-203ENST00000429416 FLNAP21333 2647 aaKnown RBP12.14□□□□□ -0.47
SMARCA4-203ENST00000429416 M0R378 163 aa12.14□□□□□ -0.47
SMARCA4-203ENST00000429416 PCP4P48539 62 aa12.14□□□□□ -0.47
SMARCA4-203ENST00000429416 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
SMARCA4-203ENST00000429416 ITPR3Q14573 2671 aa12.13□□□□□ -0.47
SMARCA4-203ENST00000429416 M0QXV9 152 aa12.13□□□□□ -0.47
SMARCA4-203ENST00000429416 HRCT1Q6UXD1 115 aa12.13□□□□□ -0.47
SMARCA4-203ENST00000429416 MUC7Q8TAX7 377 aa12.12□□□□□ -0.47
SMARCA4-203ENST00000429416 COX6A2Q02221 97 aa12.12□□□□□ -0.47
SMARCA4-203ENST00000429416 SPINK6Q6UWN8 80 aa12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 Q8IZM0 81 aa12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 ZNF706Q9Y5V0 76 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 C9orf116Q5BN46 136 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 SLPIP03973 132 aa12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 IGLV9-49A0A0B4J1Y8 123 aa12.11□□□□□ -0.47
SMARCA4-203ENST00000429416 WWC2-AS2Q96NR7 200 aa12.1□□□□□ -0.47
SMARCA4-203ENST00000429416 COL27A1Q8IZC6 1860 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-203ENST00000429416 POM121L12Q8N7R1 296 aa12.09□□□□□ -0.47
SMARCA4-203ENST00000429416 MAPKAPK5-AS1Q8N8E1 139 aa12.08□□□□□ -0.48
SMARCA4-203ENST00000429416 TRBV10-2A0A0K0K1G8 114 aa12.08□□□□□ -0.48
SMARCA4-203ENST00000429416 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
SMARCA4-203ENST00000429416 EGFEM1PQ0D2K5 195 aa12.07□□□□□ -0.48
SMARCA4-203ENST00000429416 A0A096LNT2 108 aa12.07□□□□□ -0.48
SMARCA4-203ENST00000429416 ESRGQ1W209 222 aa12.06□□□□□ -0.48
SMARCA4-203ENST00000429416 WFDC9Q8NEX5 89 aa12.06□□□□□ -0.48
SMARCA4-203ENST00000429416 C14orf132Q9NPU4 83 aa12.06□□□□□ -0.48
SMARCA4-203ENST00000429416 ZNF292O60281 2723 aa12.05□□□□□ -0.48
SMARCA4-203ENST00000429416 SETXQ7Z333 2677 aaKnown RBP12.05□□□□□ -0.48
SMARCA4-203ENST00000429416 A0A1B0GX51 115 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 RPL28P46779 137 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 IGIPA6NJ69 53 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 TRBV30A0A0K0K1B3 111 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 A0A0B4J2C4 111 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 COX17Q14061 63 aa12.04□□□□□ -0.48
SMARCA4-203ENST00000429416 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms