RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MRGPRG-AS1Q2M3A8 158 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 C11orf1Q9H5F2 150 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 GDF5OSQ5U4N7 250 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 WNK1Q9H4A3 2382 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 PROK1P58294 105 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 CDPF1Q6NVV7 123 aa6.58□□□□□ -1.36
CTNND1-208ENST00000428599 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
CTNND1-208ENST00000428599 TIMM17BO60830 172 aa6.57□□□□□ -1.36
CTNND1-208ENST00000428599 EIF4EBP1Q13541 118 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-208ENST00000428599 LST1O00453 97 aa6.57□□□□□ -1.36
CTNND1-208ENST00000428599 NDUFA7O95182 113 aa6.57□□□□□ -1.36
CTNND1-208ENST00000428599 OXLD1Q5BKU9 147 aa6.57□□□□□ -1.36
CTNND1-208ENST00000428599 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-208ENST00000428599 TRIAP1O43715 76 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 WDR87Q6ZQQ6 2873 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 NDUFV3P56181 108 aaKnown RBP6.56□□□□□ -1.36
CTNND1-208ENST00000428599 KRTAP10-9P60411 292 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 ESRGQ1W209 222 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 WFDC10AQ9H1F0 79 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 X6R8D5 127 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 KIAA1549Q9HCM3 1950 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 PRRC2AP48634 2157 aaKnown RBP6.56□□□□□ -1.36
CTNND1-208ENST00000428599 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
CTNND1-208ENST00000428599 REG3GQ6UW15 175 aa6.55□□□□□ -1.36
CTNND1-208ENST00000428599 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
CTNND1-208ENST00000428599 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
CTNND1-208ENST00000428599 C1orf134Q5TEV5 83 aa6.55□□□□□ -1.36
CTNND1-208ENST00000428599 Q8IZM0 81 aa6.55□□□□□ -1.36
CTNND1-208ENST00000428599 U3KQK5 164 aa6.55□□□□□ -1.36
CTNND1-208ENST00000428599 TLN1Q9Y490 2541 aaKnown RBP6.54□□□□□ -1.36
CTNND1-208ENST00000428599 FRMD6-AS1P0C7T7 363 aa6.54□□□□□ -1.36
CTNND1-208ENST00000428599 TSHBP01222 138 aa6.54□□□□□ -1.36
CTNND1-208ENST00000428599 SMR3AQ99954 134 aa6.54□□□□□ -1.36
CTNND1-208ENST00000428599 FAM30AQ9NZY2 134 aa6.54□□□□□ -1.36
CTNND1-208ENST00000428599 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
CTNND1-208ENST00000428599 IGLV2-8P01709 118 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 C18orf65Q6ZTR6 163 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 PRR4Q16378 134 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 CYSRT1A8MQ03 144 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 SNURFQ9Y675 71 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 EGFEM1PQ0D2K5 195 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 C1orf137Q5JT78 98 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 Q8N6K4 173 aa6.53□□□□□ -1.36
CTNND1-208ENST00000428599 ARHGAP32A7KAX9 2087 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 IGHV6-1A0A0B4J1U7 121 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 Q6ZS46 218 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 TANC2Q9HCD6 1990 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 AVPP01185 164 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 LINC01556Q5JQF7 62 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 Q6JHZ5 121 aa6.52□□□□□ -1.37
CTNND1-208ENST00000428599 ABCA2Q9BZC7 2435 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 IGLV1-40P01703 118 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 LINC00337Q8N6G1 96 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 A8MZ25 164 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 C6orf223Q8N319 242 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 RNF185Q96GF1 192 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 LIMD2Q9BT23 127 aa6.51□□□□□ -1.37
CTNND1-208ENST00000428599 MYO18BQ8IUG5 2567 aa6.5□□□□□ -1.37
CTNND1-208ENST00000428599 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
CTNND1-208ENST00000428599 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
CTNND1-208ENST00000428599 A0A1W2PPR1 153 aa6.5□□□□□ -1.37
CTNND1-208ENST00000428599 KLLNB2CW77 178 aa6.5□□□□□ -1.37
CTNND1-208ENST00000428599 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
CTNND1-208ENST00000428599 CENPFP49454 3210 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 RNASE3P12724 160 aaKnown RBP6.49□□□□□ -1.37
CTNND1-208ENST00000428599 TRBV7-6A0A0J9YX20 115 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 IGLV2-11P01706 119 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 F8WDY8 70 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 MRPS12O15235 138 aaKnown RBP6.49□□□□□ -1.37
CTNND1-208ENST00000428599 MAPKAPK5-AS1Q8N8E1 139 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 CDC42SE2Q9NRR3 84 aa6.49□□□□□ -1.37
CTNND1-208ENST00000428599 NHLRC4P0CG21 123 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-208ENST00000428599 CRIP1P50238 77 aa6.48□□□□□ -1.37
CTNND1-208ENST00000428599 HCFC1P51610 2035 aa6.48□□□□□ -1.37
CTNND1-208ENST00000428599 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
CTNND1-208ENST00000428599 TP73-AS1Q9UF72 201 aa6.48□□□□□ -1.37
CTNND1-208ENST00000428599 BRI3O95415 125 aa6.48□□□□□ -1.37
CTNND1-208ENST00000428599 Q9BRP9 147 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-208ENST00000428599 SORL1Q92673 2214 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 EML5Q05BV3 1969 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 SPINK1P00995 79 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
CTNND1-208ENST00000428599 NTM-AS1Q6ZSK4 140 aa6.46□□□□□ -1.37
CTNND1-208ENST00000428599 C2orf48Q96LS8 159 aa6.46□□□□□ -1.38
CTNND1-208ENST00000428599 CELA1Q9UNI1 258 aa6.46□□□□□ -1.38
CTNND1-208ENST00000428599 Q6ZTC4 211 aa6.46□□□□□ -1.38
CTNND1-208ENST00000428599 PRR9Q5T870 116 aa6.46□□□□□ -1.38
CTNND1-208ENST00000428599 NRACQ8N912 160 aa6.46□□□□□ -1.38
CTNND1-208ENST00000428599 ATG2AQ2TAZ0 1938 aa6.45□□□□□ -1.38
CTNND1-208ENST00000428599 ANKRD11Q6UB99 2663 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms