RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 MALP21145 153 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 SAA4P35542 130 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 DEFB1P60022 68 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 ARRDC1-AS1Q9H2J1 176 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 PRO0628Q9UI54 55 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 C16orf95Q9H693 158 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3-23P01764 117 aa3.69□□□□□ -1.82
RIF1-203ENST00000428287 F6UB75 175 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 DUX5Q96PT3 197 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 DSCR8Q96T75 97 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 TRAV13-2A0A0B4J235 113 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 LINC00167Q96N53 147 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 CHCHD7Q9BUK0 85 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 LMO4P61968 165 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 IGHV1OR15-1A0A075B7D0 117 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 IGLV1-40P01703 118 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 FHL2Q14192 279 aa3.68□□□□□ -1.82
RIF1-203ENST00000428287 TRBV10-1A0A0K0K1A3 114 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 DNAL4O96015 105 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 IGHV4-38-2P0DP08 117 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 RHPN1-AS1Q9BWJ2 59 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 C9orf129Q5T035 196 aaKnown RBP3.67□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3OR16-9A0A0B4J2B5 98 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 TRBV12-3P01733 135 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 CD28P10747 220 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 Q96MF0 132 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 Q9H8V8 135 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 UBTD1Q9HAC8 227 aa3.67□□□□□ -1.82
RIF1-203ENST00000428287 ZFP36P26651 326 aaKnown RBP3.66□□□□□ -1.82
RIF1-203ENST00000428287 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 F5H697 171 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 F8WDY8 70 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 ECSCRQ19T08 205 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 LINC00336Q6ZUF6 198 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 TRAV12-3A0A0B4J271 114 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 LINC00467Q9BRT7 94 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 NPC2P61916 151 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 A8MZ25 164 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 LY6HO94772 140 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 FBN3Q75N90 2809 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 JMJD7-PLA2G4BH0Y9G9 81 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
RIF1-203ENST00000428287 NDUFC1O43677 76 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 CFHR3Q02985 330 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 S100A7L2Q5SY68 101 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 LY6G6DO95868 133 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 TRAV7A0A075B6U4 112 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 A0A1W2PRX2 142 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.82
RIF1-203ENST00000428287 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
RIF1-203ENST00000428287 PFN2P35080 140 aa3.65□□□□□ -1.83
RIF1-203ENST00000428287 C11orf72Q8NBR9 251 aa3.65□□□□□ -1.83
RIF1-203ENST00000428287 A0A096LNT2 108 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 ESM1Q9NQ30 184 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 CDC42SE2Q9NRR3 84 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 MIR7-3HGQ8N6C7 128 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 IBA57-AS1B1ANH7 110 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 LPAL2Q16609 132 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 SYNJ2BPP57105 145 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 DEFB109BQ30KR1 87 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 SMIM11BQ8TCY0 68 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 COX6A2Q02221 97 aa3.64□□□□□ -1.83
RIF1-203ENST00000428287 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 SNRPD3P62318 126 aaKnown RBP3.63□□□□□ -1.83
RIF1-203ENST00000428287 ANK2Q01484 3957 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 TRBV6-4A0A1B0GX49 114 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 CCKP06307 115 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 NANOS2P60321 138 aaKnown RBP3.63□□□□□ -1.83
RIF1-203ENST00000428287 A0A087WZ39 114 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 SPINK13Q1W4C9 94 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 HRCT1Q6UXD1 115 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 SND1-IT1Q9HBX3 110 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 NTM-AS1Q6ZSK4 140 aa3.63□□□□□ -1.83
RIF1-203ENST00000428287 FLG2Q5D862 2391 aaPredicted RBP3.63□□□□□ -1.83
RIF1-203ENST00000428287 A0A1W2PPR1 153 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 C9orf66Q5T8R8 295 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 LINC01560Q8TB33 94 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 IGKV2-29A2NJV5 120 aaPredicted RBP3.62□□□□□ -1.83
RIF1-203ENST00000428287 CCL18P55774 89 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 ERC2-IT1O76042 136 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
RIF1-203ENST00000428287 RBMY1A1P0DJD3 496 aaKnown RBP3.61□□□□□ -1.83
RIF1-203ENST00000428287 RBMY1CP0DJD4 496 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 RBMY1FQ15415 496 aaKnown RBP3.61□□□□□ -1.83
RIF1-203ENST00000428287 Q6ZSN1 163 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 CSMD3Q7Z407 3707 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 A0A087WVE0 104 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 K7EQD1 137 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 XCL1P47992 114 aa3.61□□□□□ -1.83
RIF1-203ENST00000428287 TMEM86BQ8N661 226 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms