RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 SMKR1H3BMG3 65 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 ODF1Q14990 250 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 Q5VSD8 79 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 Q8N8P6 123 aa5.89□□□□□ -1.47
SMC1A-203ENST00000428014 LINC01546A6NGU7 62 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 APOMO95445 188 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 IFI27P40305 119 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-203ENST00000428014 RNF151Q2KHN1 245 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 FAM19A3Q7Z5A8 133 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 OR10D4PQ8NGN7 298 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 C2orf48Q96LS8 159 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
SMC1A-203ENST00000428014 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
SMC1A-203ENST00000428014 IGHV3OR16-9A0A0B4J2B5 98 aa5.87□□□□□ -1.47
SMC1A-203ENST00000428014 CIRBP-AS1Q8TBR5 109 aa5.87□□□□□ -1.47
SMC1A-203ENST00000428014 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
SMC1A-203ENST00000428014 TRAPPC1Q9Y5R8 145 aa5.87□□□□□ -1.47
SMC1A-203ENST00000428014 COX7A2LO14548 114 aa5.86□□□□□ -1.47
SMC1A-203ENST00000428014 SLPIP03973 132 aa5.86□□□□□ -1.47
SMC1A-203ENST00000428014 FUSP35637 526 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMC1A-203ENST00000428014 SEC11AP67812 179 aa5.86□□□□□ -1.47
SMC1A-203ENST00000428014 FAM104AQ969W3 186 aa5.86□□□□□ -1.47
SMC1A-203ENST00000428014 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
SMC1A-203ENST00000428014 XCL1P47992 114 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 FABP9Q0Z7S8 132 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 SPACA4Q8TDM5 124 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 DEFB104AQ8WTQ1 72 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 TMEM141Q96I45 108 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 AMELXQ99217 191 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 FAT1Q14517 4588 aa5.85□□□□□ -1.47
SMC1A-203ENST00000428014 DMBT1Q9UGM3 2413 aaPredicted RBP5.85□□□□□ -1.47
SMC1A-203ENST00000428014 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 A0A087WZ39 114 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 IGIPA6NJ69 53 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 C2orf66Q6UXQ4 117 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 Q6ZN92 141 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 Q6ZUT4 128 aa5.84□□□□□ -1.47
SMC1A-203ENST00000428014 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 IGLV4-69A0A075B6H9 119 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 IGLV4-3A0A075B6K6 122 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 IGKV3OR2-268A0A0C4DH90 116 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 TRGC2P03986 189 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 INAFM2P0DMQ5 153 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 MALP21145 153 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
SMC1A-203ENST00000428014 RPL39P62891 51 aaKnown RBP5.83□□□□□ -1.48
SMC1A-203ENST00000428014 SYCNQ0VAF6 134 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 TEX43Q6ZNM6 134 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 TOMM6Q96B49 74 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 CARD19Q96LW7 228 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 C2orf88Q9BSF0 95 aa5.83□□□□□ -1.48
SMC1A-203ENST00000428014 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
SMC1A-203ENST00000428014 TRAV13-1A0A0B4J241 112 aa5.82□□□□□ -1.48
SMC1A-203ENST00000428014 IFITM10A6NMD0 228 aa5.82□□□□□ -1.48
SMC1A-203ENST00000428014 TLX1NBP0CAT3 122 aa5.82□□□□□ -1.48
SMC1A-203ENST00000428014 KIAA1644Q3SXP7 199 aa5.82□□□□□ -1.48
SMC1A-203ENST00000428014 ERASQ7Z444 233 aa5.82□□□□□ -1.48
SMC1A-203ENST00000428014 ALKBH7Q9BT30 221 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-203ENST00000428014 FLG2Q5D862 2391 aaPredicted RBP5.82□□□□□ -1.48
SMC1A-203ENST00000428014 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
SMC1A-203ENST00000428014 UBE2D1P51668 147 aa5.81□□□□□ -1.48
SMC1A-203ENST00000428014 HERVK_113P63121 156 aa5.81□□□□□ -1.48
SMC1A-203ENST00000428014 LINC00242Q5T6M2 205 aa5.81□□□□□ -1.48
SMC1A-203ENST00000428014 VCX2Q9H322 139 aa5.81□□□□□ -1.48
SMC1A-203ENST00000428014 A0A087WYN8 130 aa5.8□□□□□ -1.48
SMC1A-203ENST00000428014 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
SMC1A-203ENST00000428014 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
SMC1A-203ENST00000428014 RAB5BP61020 215 aa5.8□□□□□ -1.48
SMC1A-203ENST00000428014 COX6A2Q02221 97 aa5.8□□□□□ -1.48
SMC1A-203ENST00000428014 LINC01620Q4KN68 170 aa5.8□□□□□ -1.48
SMC1A-203ENST00000428014 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 NDUFA1O15239 70 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 OXTP01178 125 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 LINC00173Q6ZV60 143 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 PRSS3P2Q8NHM4 247 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 C18orf32Q8TCD1 76 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 CAMK2N2Q96S95 79 aa5.79□□□□□ -1.48
SMC1A-203ENST00000428014 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BKO60814 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BJP06899 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BOP23527 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BBP33778 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 CXCL5P42830 114 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BDP58876 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST1H2BCP62807 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 SPAG11BQ08648 103 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST2H2BEQ16778 126 aa5.78□□□□□ -1.48
SMC1A-203ENST00000428014 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.78□□□□□ -1.48
SMC1A-203ENST00000428014 Q8IZM0 81 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms