RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 PKIGQ9Y2B9 76 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 DNAH8Q96JB1 4490 aa13.22□□□□□ -0.29
HSPG2-205ENST00000427897 COLCA2A8K830 154 aa13.21□□□□□ -0.29
HSPG2-205ENST00000427897 CHTF8P0CG12 524 aa13.21□□□□□ -0.29
HSPG2-205ENST00000427897 IFI27P40305 119 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-205ENST00000427897 RPL39P62891 51 aaKnown RBP13.21□□□□□ -0.29
HSPG2-205ENST00000427897 G0S2P27469 103 aa13.2□□□□□ -0.3
HSPG2-205ENST00000427897 LINC00526Q96FQ7 95 aa13.2□□□□□ -0.3
HSPG2-205ENST00000427897 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
HSPG2-205ENST00000427897 VPS13BQ7Z7G8 4022 aa13.19□□□□□ -0.3
HSPG2-205ENST00000427897 IGKV2-24A0A0C4DH68 120 aa13.19□□□□□ -0.3
HSPG2-205ENST00000427897 APOMO95445 188 aa13.19□□□□□ -0.3
HSPG2-205ENST00000427897 MAJINQ3KP22 176 aa13.19□□□□□ -0.3
HSPG2-205ENST00000427897 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
HSPG2-205ENST00000427897 A0A087WYN8 130 aa13.18□□□□□ -0.3
HSPG2-205ENST00000427897 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
HSPG2-205ENST00000427897 SPACA4Q8TDM5 124 aa13.18□□□□□ -0.3
HSPG2-205ENST00000427897 SYCNQ0VAF6 134 aa13.17□□□□□ -0.3
HSPG2-205ENST00000427897 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
HSPG2-205ENST00000427897 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
HSPG2-205ENST00000427897 C18orf32Q8TCD1 76 aa13.17□□□□□ -0.3
HSPG2-205ENST00000427897 TRGC2P03986 189 aa13.16□□□□□ -0.3
HSPG2-205ENST00000427897 LINC01546A6NGU7 62 aa13.15□□□□□ -0.3
HSPG2-205ENST00000427897 RAB5BP61020 215 aa13.15□□□□□ -0.3
HSPG2-205ENST00000427897 C7orf33Q8WU49 177 aa13.15□□□□□ -0.3
HSPG2-205ENST00000427897 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
HSPG2-205ENST00000427897 CYSLTR1Q9Y271 337 aa13.15□□□□□ -0.3
HSPG2-205ENST00000427897 IGLV4-69A0A075B6H9 119 aa13.14□□□□□ -0.31
HSPG2-205ENST00000427897 IFITM10A6NMD0 228 aa13.14□□□□□ -0.31
HSPG2-205ENST00000427897 MRPS36P82909 103 aaKnown RBP13.14□□□□□ -0.31
HSPG2-205ENST00000427897 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
HSPG2-205ENST00000427897 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
HSPG2-205ENST00000427897 C2orf66Q6UXQ4 117 aa13.13□□□□□ -0.31
HSPG2-205ENST00000427897 STPG4Q8N801 248 aa13.13□□□□□ -0.31
HSPG2-205ENST00000427897 CAMK2N2Q96S95 79 aa13.13□□□□□ -0.31
HSPG2-205ENST00000427897 PLAC8Q9NZF1 115 aa13.12□□□□□ -0.31
HSPG2-205ENST00000427897 PYGO1Q9Y3Y4 419 aa13.12□□□□□ -0.31
HSPG2-205ENST00000427897 LINC00614P0C842 121 aa13.11□□□□□ -0.31
HSPG2-205ENST00000427897 KRTAP10-4P60372 401 aaPredicted RBP13.11□□□□□ -0.31
HSPG2-205ENST00000427897 A0A096LNI7 61 aa13.1□□□□□ -0.31
HSPG2-205ENST00000427897 NPSP0C0P6 89 aa13.1□□□□□ -0.31
HSPG2-205ENST00000427897 LOC107984640A0A0U1RRK4 108 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
HSPG2-205ENST00000427897 SPAG11BQ08648 103 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 Q6ZN92 141 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 Q6ZRU5 148 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 TOMM6Q96B49 74 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 TMEM141Q96I45 108 aa13.09□□□□□ -0.31
HSPG2-205ENST00000427897 GAGE2BQ13066 116 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 TEX43Q6ZNM6 134 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 BAGE3Q86Y29 109 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
HSPG2-205ENST00000427897 C2orf48Q96LS8 159 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
HSPG2-205ENST00000427897 FLG2Q5D862 2391 aaPredicted RBP13.08□□□□□ -0.32
HSPG2-205ENST00000427897 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
HSPG2-205ENST00000427897 OR10D4PQ8NGN7 298 aa13.07□□□□□ -0.32
HSPG2-205ENST00000427897 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
HSPG2-205ENST00000427897 TIMM17AQ99595 171 aa13.06□□□□□ -0.32
HSPG2-205ENST00000427897 OXTP01178 125 aa13.05□□□□□ -0.32
HSPG2-205ENST00000427897 FAM104AQ969W3 186 aa13.05□□□□□ -0.32
HSPG2-205ENST00000427897 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
HSPG2-205ENST00000427897 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
HSPG2-205ENST00000427897 VCX2Q9H322 139 aa13.05□□□□□ -0.32
HSPG2-205ENST00000427897 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
HSPG2-205ENST00000427897 IGIPA6NJ69 53 aa13.04□□□□□ -0.32
HSPG2-205ENST00000427897 HBDP02042 147 aa13.04□□□□□ -0.32
HSPG2-205ENST00000427897 ERASQ7Z444 233 aa13.04□□□□□ -0.32
HSPG2-205ENST00000427897 RPL18AQ02543 176 aaKnown RBP13.03□□□□□ -0.32
HSPG2-205ENST00000427897 F8WDY8 70 aa13.02□□□□□ -0.33
HSPG2-205ENST00000427897 PTTG1IPP53801 180 aa13.02□□□□□ -0.33
HSPG2-205ENST00000427897 NDUFA1O15239 70 aa13.01□□□□□ -0.33
HSPG2-205ENST00000427897 A0A0J9YXV3 536 aa13□□□□□ -0.33
HSPG2-205ENST00000427897 HSBP1O75506 76 aa13□□□□□ -0.33
HSPG2-205ENST00000427897 HNRNPA3P51991 378 aaKnown RBP13□□□□□ -0.33
HSPG2-205ENST00000427897 LINC00242Q5T6M2 205 aa13□□□□□ -0.33
HSPG2-205ENST00000427897 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-205ENST00000427897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-205ENST00000427897 RNF151Q2KHN1 245 aa12.99□□□□□ -0.33
HSPG2-205ENST00000427897 AMELXQ99217 191 aa12.99□□□□□ -0.33
HSPG2-205ENST00000427897 MYCBP2O75592 4640 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 A0A087WZ39 114 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 A0A096LNJ9 63 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BKO60814 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 SERF1AO75920 110 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BJP06899 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BOP23527 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BBP33778 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 UBE2D1P51668 147 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BDP58876 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BCP62807 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 PMCHL1Q16048 86 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST2H2BEQ16778 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
HSPG2-205ENST00000427897 MRPL35Q9NZE8 188 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms