RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 SLPIP03973 132 aa16.27■□□□□ 0.2
HERPUD2-205ENST00000427455 C5orf38Q86SI9 138 aa16.26■□□□□ 0.19
HERPUD2-205ENST00000427455 SCGB3A1Q96QR1 104 aa16.26■□□□□ 0.19
HERPUD2-205ENST00000427455 IGHV3OR16-9A0A0B4J2B5 98 aa16.25■□□□□ 0.19
HERPUD2-205ENST00000427455 LINC00614P0C842 121 aa16.25■□□□□ 0.19
HERPUD2-205ENST00000427455 UBE2D1P51668 147 aa16.25■□□□□ 0.19
HERPUD2-205ENST00000427455 RAB5BP61020 215 aa16.25■□□□□ 0.19
HERPUD2-205ENST00000427455 URB1-AS1Q96HZ7 61 aa16.25■□□□□ 0.19
HERPUD2-205ENST00000427455 APOMO95445 188 aa16.24■□□□□ 0.19
HERPUD2-205ENST00000427455 LINC00242Q5T6M2 205 aa16.24■□□□□ 0.19
HERPUD2-205ENST00000427455 ZC2HC1BQ5TFG8 222 aa16.24■□□□□ 0.19
HERPUD2-205ENST00000427455 ZNF561-AS1K7EIQ3 104 aa16.23■□□□□ 0.19
HERPUD2-205ENST00000427455 IGHV3-64A0A075B6Q5 118 aa16.21■□□□□ 0.19
HERPUD2-205ENST00000427455 HAMPP81172 84 aa16.21■□□□□ 0.19
HERPUD2-205ENST00000427455 COLCA2A8K830 154 aa16.2■□□□□ 0.18
HERPUD2-205ENST00000427455 TRGC2P03986 189 aa16.2■□□□□ 0.18
HERPUD2-205ENST00000427455 FAM19A3Q7Z5A8 133 aa16.2■□□□□ 0.18
HERPUD2-205ENST00000427455 LINC00526Q96FQ7 95 aa16.2■□□□□ 0.18
HERPUD2-205ENST00000427455 A0A096LNJ9 63 aa16.19■□□□□ 0.18
HERPUD2-205ENST00000427455 HBDP02042 147 aa16.19■□□□□ 0.18
HERPUD2-205ENST00000427455 SDIM1Q6ZPB5 146 aa16.19■□□□□ 0.18
HERPUD2-205ENST00000427455 OR10D4PQ8NGN7 298 aa16.19■□□□□ 0.18
HERPUD2-205ENST00000427455 A0A087WZ39 114 aa16.18■□□□□ 0.18
HERPUD2-205ENST00000427455 COX6A2Q02221 97 aa16.18■□□□□ 0.18
HERPUD2-205ENST00000427455 Q8N1X5 172 aa16.18■□□□□ 0.18
HERPUD2-205ENST00000427455 SEC11AP67812 179 aa16.17■□□□□ 0.18
HERPUD2-205ENST00000427455 SPAG11BQ08648 103 aa16.17■□□□□ 0.18
HERPUD2-205ENST00000427455 CARD19Q96LW7 228 aa16.17■□□□□ 0.18
HERPUD2-205ENST00000427455 IGLV4-69A0A075B6H9 119 aa16.16■□□□□ 0.18
HERPUD2-205ENST00000427455 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.16■□□□□ 0.18
HERPUD2-205ENST00000427455 ORAOV1Q8WV07 137 aa16.16■□□□□ 0.18
HERPUD2-205ENST00000427455 CHCHD1Q96BP2 118 aaKnown RBP16.16■□□□□ 0.18
HERPUD2-205ENST00000427455 CHAC1Q9BUX1 264 aa16.16■□□□□ 0.18
HERPUD2-205ENST00000427455 SCO1O75880 301 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 SYCNQ0VAF6 134 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 PMCHL1Q16048 86 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 SCXQ7RTU7 201 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 C2orf48Q96LS8 159 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 KRTAP17-1Q9BYP8 105 aa16.15■□□□□ 0.18
HERPUD2-205ENST00000427455 FAT1Q14517 4588 aa16.14■□□□□ 0.17
HERPUD2-205ENST00000427455 HERVK_113P63121 156 aa16.14■□□□□ 0.17
HERPUD2-205ENST00000427455 LINC01561Q8N1V8 128 aa16.14■□□□□ 0.17
HERPUD2-205ENST00000427455 PMVKQ15126 192 aa16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 PDZD11Q5EBL8 140 aa16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 CAMK2N2Q96S95 79 aa16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 CST9LQ9H4G1 147 aa16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 GEMIN7Q9H840 131 aaKnown RBP16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 PKIGQ9Y2B9 76 aa16.12■□□□□ 0.17
HERPUD2-205ENST00000427455 BAGE3Q86Y29 109 aa16.11■□□□□ 0.17
HERPUD2-205ENST00000427455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.11■□□□□ 0.17
HERPUD2-205ENST00000427455 A0A0J9YXV3 536 aa16.1■□□□□ 0.17
HERPUD2-205ENST00000427455 Q6ZRU5 148 aa16.1■□□□□ 0.17
HERPUD2-205ENST00000427455 CIRBP-AS1Q8TBR5 109 aa16.1■□□□□ 0.17
HERPUD2-205ENST00000427455 F8WDY8 70 aa16.09■□□□□ 0.17
HERPUD2-205ENST00000427455 ATP5LO75964 103 aa16.09■□□□□ 0.17
HERPUD2-205ENST00000427455 SMR3BP02814 79 aaPredicted RBP16.09■□□□□ 0.17
HERPUD2-205ENST00000427455 CIRBPQ14011 172 aaKnown RBP16.09■□□□□ 0.17
HERPUD2-205ENST00000427455 TINCRA0A1B0GVN0 87 aa16.08■□□□□ 0.16
HERPUD2-205ENST00000427455 PANO1I0J062 215 aa16.08■□□□□ 0.16
HERPUD2-205ENST00000427455 CDKN2A-AS1Q9UH64 79 aa16.08■□□□□ 0.16
HERPUD2-205ENST00000427455 ABCA13Q86UQ4 5058 aa16.06■□□□□ 0.16
HERPUD2-205ENST00000427455 HSBP1O75506 76 aa16.06■□□□□ 0.16
HERPUD2-205ENST00000427455 CHTF8P0CG12 524 aa16.06■□□□□ 0.16
HERPUD2-205ENST00000427455 LINC00469Q8N7U9 141 aa16.06■□□□□ 0.16
HERPUD2-205ENST00000427455 EPM2AB3EWF7 344 aa16.05■□□□□ 0.16
HERPUD2-205ENST00000427455 NDUFA1O15239 70 aa16.05■□□□□ 0.16
HERPUD2-205ENST00000427455 SPACA4Q8TDM5 124 aa16.05■□□□□ 0.16
HERPUD2-205ENST00000427455 PACRGQ96M98 296 aaPredicted RBP16.05■□□□□ 0.16
HERPUD2-205ENST00000427455 KRTAP4-5Q9BYR2 181 aa16.05■□□□□ 0.16
HERPUD2-205ENST00000427455 IGLV5-45A0A087WSX0 123 aa16.04■□□□□ 0.16
HERPUD2-205ENST00000427455 NDUFA6P56556 154 aa16.04■□□□□ 0.16
HERPUD2-205ENST00000427455 KIAA0087Q14695 138 aa16.04■□□□□ 0.16
HERPUD2-205ENST00000427455 Q5VSD8 79 aa16.04■□□□□ 0.16
HERPUD2-205ENST00000427455 MRPL35Q9NZE8 188 aaKnown RBP16.04■□□□□ 0.16
HERPUD2-205ENST00000427455 A0A096LNI7 61 aa16.02■□□□□ 0.16
HERPUD2-205ENST00000427455 IGKV2-24A0A0C4DH68 120 aa16.02■□□□□ 0.16
HERPUD2-205ENST00000427455 FAM229AH3BQW9 127 aa16.02■□□□□ 0.16
HERPUD2-205ENST00000427455 SERF1AO75920 110 aa16.02■□□□□ 0.16
HERPUD2-205ENST00000427455 RNF151Q2KHN1 245 aa16.02■□□□□ 0.16
HERPUD2-205ENST00000427455 LOC107984640A0A0U1RRK4 108 aa16.01■□□□□ 0.15
HERPUD2-205ENST00000427455 LINC00310P59036 64 aa16.01■□□□□ 0.15
HERPUD2-205ENST00000427455 LINC00474Q9P2X8 69 aa16.01■□□□□ 0.15
HERPUD2-205ENST00000427455 PRSS2P07478 247 aa16■□□□□ 0.15
HERPUD2-205ENST00000427455 IGLC3P0DOY3 106 aa16■□□□□ 0.15
HERPUD2-205ENST00000427455 LINC00528Q8N1L1 170 aa16■□□□□ 0.15
HERPUD2-205ENST00000427455 FAM19A2Q8N3H0 131 aa16■□□□□ 0.15
HERPUD2-205ENST00000427455 PCLOQ9Y6V0 5065 aa16■□□□□ 0.15
HERPUD2-205ENST00000427455 VPS13BQ7Z7G8 4022 aa15.99■□□□□ 0.15
HERPUD2-205ENST00000427455 UNQ6190/PRO20217Q6UXQ8 127 aa15.99■□□□□ 0.15
HERPUD2-205ENST00000427455 Q8IZM0 81 aa15.99■□□□□ 0.15
HERPUD2-205ENST00000427455 DPH3Q96FX2 82 aa15.99■□□□□ 0.15
HERPUD2-205ENST00000427455 TOMM7Q9P0U1 55 aa15.99■□□□□ 0.15
HERPUD2-205ENST00000427455 A0A087WYN8 130 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 SMIM1B2RUZ4 78 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 S100A1P23297 94 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 MAJINQ3KP22 176 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 C10orf25Q5T742 122 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 IFI27L1Q96BM0 104 aa15.98■□□□□ 0.15
HERPUD2-205ENST00000427455 H3BRM9 83 aa15.96■□□□□ 0.15
HERPUD2-205ENST00000427455 PTTG1IPP53801 180 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms