RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 FSHBP01225 129 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 ZNF843Q8N446 348 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 CDC42SE2Q9NRR3 84 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 LOC100131303A0A0U1RQF7 123 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 BAALC-AS2P0C853 105 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 RPL35AP18077 110 aaKnown RBP5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 Q96MF0 132 aa5.37□□□□□ -1.55
SMARCC1-202ENST00000425518 HELZ2Q9BYK8 2649 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 PLA2G2AP14555 144 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 DAZ2Q13117 558 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 DAZ4Q86SG3 579 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 CHCHD5Q9BSY4 110 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 DAZ3Q9NR90 486 aaKnown RBP5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 Q6Q795 121 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 TMEM243Q9BU79 118 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 Q9HAA7 133 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
SMARCC1-202ENST00000425518 TRBV10-1A0A0K0K1A3 114 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 CCL24O00175 119 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 C3orf56Q8N813 242 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 LINC00158P58513 81 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 SHISA2Q6UWI4 295 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 F5H768 121 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 MIR7-3HGQ8N6C7 128 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 FAM218AQ96MZ4 157 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 NBPF19A0A087WUL8 3843 aa5.35□□□□□ -1.55
SMARCC1-202ENST00000425518 TRGV4A0A0C4DH28 118 aa5.34□□□□□ -1.55
SMARCC1-202ENST00000425518 DEFB121Q5J5C9 76 aa5.34□□□□□ -1.55
SMARCC1-202ENST00000425518 HERV-K104P63124 156 aa5.34□□□□□ -1.55
SMARCC1-202ENST00000425518 CSDC2Q9Y534 153 aaKnown RBP5.34□□□□□ -1.55
SMARCC1-202ENST00000425518 SETXQ7Z333 2677 aaKnown RBP5.34□□□□□ -1.56
SMARCC1-202ENST00000425518 FAM240AA0A1B0GVK7 77 aa5.34□□□□□ -1.56
SMARCC1-202ENST00000425518 DEFB113Q30KQ7 82 aa5.34□□□□□ -1.56
SMARCC1-202ENST00000425518 CRPP02741 224 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 PFN2P35080 140 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 MRPL23Q16540 153 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 C5orf38Q86SI9 138 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 COX7B2Q8TF08 81 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 C11orf68Q9H3H3 251 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 SND1-IT1Q9HBX3 110 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 ITPR3Q14573 2671 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 FLNAP21333 2647 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 FAM236AA0A1B0GUQ0 79 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 FAM236BA0A1B0GV22 79 aa5.33□□□□□ -1.56
SMARCC1-202ENST00000425518 TRAV25A0A0B4J276 109 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 TRACP01848 142 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 IL17DQ8TAD2 202 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 TENM4Q6N022 2769 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 IGLV4-60A0A075B6I1 120 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 TRAV13-2A0A0B4J235 113 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 OR13C6PQ8NH95 151 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 SMCR5Q8TEV8 140 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 NBEAL2Q6ZNJ1 2754 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 ATP5G1P05496 136 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 HIVEP2P31629 2446 aa5.32□□□□□ -1.56
SMARCC1-202ENST00000425518 DNAJC9-AS1A6NH13 148 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 DNAL4O96015 105 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 ACYP1P07311 99 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 FAM19A3Q7Z5A8 133 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 PAX4O43316 350 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 DEFB130BP0DP73 79 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 DEFB130AP0DP74 79 aa5.31□□□□□ -1.56
SMARCC1-202ENST00000425518 IGKV2-28A0A075B6P5 120 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 TRBV7-7A0A0K0K1E9 115 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 IGKV2D-28P01615 120 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 MALP21145 153 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 SMIM11BQ8TCY0 68 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 APCP25054 2843 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 CCL18P55774 89 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 SMIM20Q8N5G0 67 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 CR1P17927 2039 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 A0A087WYN8 130 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 RPL28P46779 137 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 C16orf74Q96GX8 76 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 ESM1Q9NQ30 184 aa5.3□□□□□ -1.56
SMARCC1-202ENST00000425518 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 TRBV6-8A0A0A6YYG3 113 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 WFDC11Q8NEX6 87 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 TRBV6-4A0A1B0GX49 114 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 PLAC8L1A1L4L8 177 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 CLPSL2Q6UWE3 100 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 GCN1Q92616 2671 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 A0A096LPF7 62 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 PF4P02776 101 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 SLPIP03973 132 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 INAFM2P0DMQ5 153 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 XCL1P47992 114 aa5.29□□□□□ -1.56
SMARCC1-202ENST00000425518 IGHV3OR16-9A0A0B4J2B5 98 aa5.28□□□□□ -1.56
SMARCC1-202ENST00000425518 C14orf132Q9NPU4 83 aa5.28□□□□□ -1.56
SMARCC1-202ENST00000425518 LECT2O14960 151 aa5.28□□□□□ -1.56
SMARCC1-202ENST00000425518 FHL2Q14192 279 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms