RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 PRR9Q5T870 116 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 C9orf47Q6ZRZ4 202 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 VSIG2Q96IQ7 327 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 NACAE9PAV3 2078 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 KLLNB2CW77 178 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 LINC00313P59037 77 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 KRTAP1-1Q07627 177 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 DEFB136Q30KP8 78 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 HECTD1Q9ULT8 2610 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 MYO9AB2RTY4 2548 aa6.16□□□□□ -1.42
VPS8-204ENST00000424463 IGKV3D-20A0A0C4DH25 116 aa6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1BA6NDE4 496 aaKnown RBP6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1EA6NEQ0 496 aaKnown RBP6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1DP0C7P1 496 aaKnown RBP6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
VPS8-204ENST00000424463 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
VPS8-204ENST00000424463 SOSTDC1Q6X4U4 206 aa6.15□□□□□ -1.42
VPS8-204ENST00000424463 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.43
VPS8-204ENST00000424463 IGHV3-33P01772 117 aa6.15□□□□□ -1.43
VPS8-204ENST00000424463 TWIST1Q15672 202 aa6.15□□□□□ -1.43
VPS8-204ENST00000424463 OPRPNQ99935 248 aaPredicted RBP6.15□□□□□ -1.43
VPS8-204ENST00000424463 ESM1Q9NQ30 184 aa6.15□□□□□ -1.43
VPS8-204ENST00000424463 DNAJC9-AS1A6NH13 148 aa6.14□□□□□ -1.43
VPS8-204ENST00000424463 FASNP49327 2511 aaKnown RBP6.14□□□□□ -1.43
VPS8-204ENST00000424463 SLURP1P55000 103 aa6.14□□□□□ -1.43
VPS8-204ENST00000424463 ZNF876PQ49A33 203 aa6.14□□□□□ -1.43
VPS8-204ENST00000424463 Q6JHZ5 121 aa6.14□□□□□ -1.43
VPS8-204ENST00000424463 ANK3Q12955 4377 aaKnown RBP6.13□□□□□ -1.43
VPS8-204ENST00000424463 RNASE4P34096 147 aaKnown RBP6.13□□□□□ -1.43
VPS8-204ENST00000424463 Q6ZSV7 163 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 ZFAND2AQ8N6M9 145 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 DAND5Q8N907 189 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 NRACQ8N912 160 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 SMR3AQ99954 134 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 Q1T7F1 81 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 DIRC1Q969H9 104 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 UBE2D4Q9Y2X8 147 aa6.13□□□□□ -1.43
VPS8-204ENST00000424463 TRAV8-3A0A0A6YYJ7 113 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 A6NN06 94 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 D6R8Y8 96 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 GAS8-AS1O95177 125 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 MRPL51Q4U2R6 128 aaKnown RBP6.12□□□□□ -1.43
VPS8-204ENST00000424463 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
VPS8-204ENST00000424463 LOC389332A0A1B0GUA5 103 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 PRYO14603 147 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 PRSS2P07478 247 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
VPS8-204ENST00000424463 TIMM21Q9BVV7 248 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 NIPBLQ6KC79 2804 aaeCLIP6.11□□□□□ -1.43
VPS8-204ENST00000424463 MTORP42345 2549 aa6.11□□□□□ -1.43
VPS8-204ENST00000424463 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
VPS8-204ENST00000424463 COX7A2LO14548 114 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 GNRH2O43555 120 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 NDUFC1O43677 76 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 GHRHP01286 108 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 UBE2BP63146 152 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 ESRGQ1W209 222 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 LENEPQ9Y5L5 61 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 NOTCH2Q04721 2471 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
VPS8-204ENST00000424463 A0A087WVE0 104 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 H0Y9J4 135 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 BCE1O60756 84 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 NXPH4O95158 308 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 PIK3CD-AS1Q5SR53 167 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 KLHL30-AS1Q8NEE0 82 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 TMEM263Q8WUH6 116 aaKnown RBP6.1□□□□□ -1.43
VPS8-204ENST00000424463 RNF185Q96GF1 192 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 CNFNQ9BYD5 112 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 U3KQK5 164 aa6.1□□□□□ -1.43
VPS8-204ENST00000424463 SORL1Q92673 2214 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 OTOGQ6ZRI0 2925 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 F8WEM9 126 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 K7EQG2 157 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 IGHV3-30P01768 117 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 IGHV3-30-5P0DP03 117 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 CKS2P33552 79 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 FXYD7P58549 80 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 TRAV21A0A0B4J279 112 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 CD28P10747 220 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 ORMDL3Q8N138 153 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
VPS8-204ENST00000424463 A0A087WZ39 114 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 C19orf73Q9NVV2 129 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 TRAV12-3A0A0B4J271 114 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 A0A0J9YX75 114 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 TMEM223A0PJW6 202 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 SPANXN1Q5VSR9 72 aa6.08□□□□□ -1.44
VPS8-204ENST00000424463 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS8-204ENST00000424463 MP68P56378 58 aa6.07□□□□□ -1.44
VPS8-204ENST00000424463 NKAPP1Q8N9T2 125 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms