RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 NEXN-AS1Q8NBZ9 246 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 AP1S3Q96PC3 154 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 PPDPFQ9H3Y8 114 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
UFD1-203ENST00000421968 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
UFD1-203ENST00000421968 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.3
UFD1-203ENST00000421968 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 APCSP02743 223 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 FAM104BQ5XKR9 115 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 MRPL54Q6P161 138 aaKnown RBP6.9□□□□□ -1.3
UFD1-203ENST00000421968 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 LINC00526Q96FQ7 95 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 TPPP3Q9BW30 176 aa6.9□□□□□ -1.3
UFD1-203ENST00000421968 SMIM17P0DL12 118 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 CAMPP49913 170 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 RAB4BP61018 213 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 LINC00337Q8N6G1 96 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 OR10AG1Q8NH19 301 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 MRAP2Q96G30 205 aa6.89□□□□□ -1.31
UFD1-203ENST00000421968 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
UFD1-203ENST00000421968 TRGC2P03986 189 aa6.88□□□□□ -1.31
UFD1-203ENST00000421968 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
UFD1-203ENST00000421968 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
UFD1-203ENST00000421968 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
UFD1-203ENST00000421968 IGKV3OR2-268A0A0C4DH90 116 aa6.87□□□□□ -1.31
UFD1-203ENST00000421968 M0R381 172 aa6.87□□□□□ -1.31
UFD1-203ENST00000421968 IGHV1-24A0A0C4DH33 117 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 A0A1B0GUV1 79 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 PRSS47A8MTI9 375 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 RAB4AP20338 218 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 IQCJQ1A5X6 159 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 KRTAP19-2Q3LHN2 52 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
UFD1-203ENST00000421968 A0A087X002 238 aa6.85□□□□□ -1.31
UFD1-203ENST00000421968 K7EMI3 77 aa6.85□□□□□ -1.31
UFD1-203ENST00000421968 M0R2T5 61 aa6.85□□□□□ -1.31
UFD1-203ENST00000421968 CKS2P33552 79 aa6.85□□□□□ -1.31
UFD1-203ENST00000421968 ZNF56Q15929 161 aa6.85□□□□□ -1.31
UFD1-203ENST00000421968 COA6Q5JTJ3 125 aaKnown RBP6.85□□□□□ -1.31
UFD1-203ENST00000421968 TCAPO15273 167 aa6.84□□□□□ -1.31
UFD1-203ENST00000421968 S100A6P06703 90 aa6.84□□□□□ -1.31
UFD1-203ENST00000421968 FGF6P10767 208 aa6.84□□□□□ -1.31
UFD1-203ENST00000421968 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
UFD1-203ENST00000421968 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
UFD1-203ENST00000421968 C20orf78Q9BR46 151 aa6.84□□□□□ -1.31
UFD1-203ENST00000421968 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
UFD1-203ENST00000421968 USH2AO75445 5202 aa6.84□□□□□ -1.31
UFD1-203ENST00000421968 HIST1H2BKO60814 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BJP06899 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BOP23527 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 G0S2P27469 103 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BBP33778 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BDP58876 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BCP62807 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST2H2BEQ16778 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.83□□□□□ -1.32
UFD1-203ENST00000421968 AMN1Q8IY45 258 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BHQ93079 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BNQ99877 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 HIST1H2BMQ99879 126 aa6.83□□□□□ -1.32
UFD1-203ENST00000421968 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
UFD1-203ENST00000421968 LINC01549A6NIU2 74 aa6.82□□□□□ -1.32
UFD1-203ENST00000421968 PMCHP20382 165 aa6.82□□□□□ -1.32
UFD1-203ENST00000421968 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
UFD1-203ENST00000421968 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
UFD1-203ENST00000421968 NXT2Q9NPJ8 142 aaKnown RBP6.82□□□□□ -1.32
UFD1-203ENST00000421968 MUC21A0A140T8X8 626 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 D6R8Y8 96 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 TSHBP01222 138 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 ESDP10768 282 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 RPL18AQ02543 176 aaKnown RBP6.81□□□□□ -1.32
UFD1-203ENST00000421968 CHCHD1Q96BP2 118 aaKnown RBP6.81□□□□□ -1.32
UFD1-203ENST00000421968 TMEM243Q9BU79 118 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 MAP1LC3AQ9H492 121 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 NIT2Q9NQR4 276 aa6.81□□□□□ -1.32
UFD1-203ENST00000421968 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
UFD1-203ENST00000421968 IGHV1-58A0A0C4DH39 117 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 F5H697 171 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 SSTP61278 116 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 LINC00304Q8N9R0 145 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 C18orf32Q8TCD1 76 aa6.8□□□□□ -1.32
UFD1-203ENST00000421968 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 M0QY20 66 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 MGPP08493 103 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 LINC00614P0C842 121 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 FOXI1Q12951 378 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 KIAA1644Q3SXP7 199 aa6.79□□□□□ -1.32
UFD1-203ENST00000421968 C5orf52A6NGY3 159 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 VCYO14598 125 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 UBE2L6O14933 153 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 APOMO95445 188 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 SUMO2P61956 95 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms