RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMEM18Q96B42 140 aa10.79□□□□□ -0.68
MSH6-203ENST00000420813 TMA7Q9Y2S6 64 aaKnown RBP10.79□□□□□ -0.68
MSH6-203ENST00000420813 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 TRAV9-1A0A075B6T8 112 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
MSH6-203ENST00000420813 REG3GQ6UW15 175 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 C2orf48Q96LS8 159 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 C20orf78Q9BR46 151 aa10.78□□□□□ -0.68
MSH6-203ENST00000420813 TRAV13-1A0A0B4J241 112 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 A0A1B0GW15 77 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 SMIM27A0A1W2PRY6 76 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 TCAPO15273 167 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 RAB5AP20339 215 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.69
MSH6-203ENST00000420813 SRSF9Q13242 221 aaKnown RBP eCLIP10.77□□□□□ -0.69
MSH6-203ENST00000420813 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
MSH6-203ENST00000420813 Q6ZUT4 128 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 CAMK2N2Q96S95 79 aa10.77□□□□□ -0.69
MSH6-203ENST00000420813 APOMO95445 188 aa10.76□□□□□ -0.69
MSH6-203ENST00000420813 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
MSH6-203ENST00000420813 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
MSH6-203ENST00000420813 LRP2P98164 4655 aa10.75□□□□□ -0.69
MSH6-203ENST00000420813 CKS2P33552 79 aa10.74□□□□□ -0.69
MSH6-203ENST00000420813 KRTAP10-8P60410 259 aa10.74□□□□□ -0.69
MSH6-203ENST00000420813 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
MSH6-203ENST00000420813 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.73□□□□□ -0.69
MSH6-203ENST00000420813 RNF151Q2KHN1 245 aa10.73□□□□□ -0.69
MSH6-203ENST00000420813 OR10D4PQ8NGN7 298 aa10.73□□□□□ -0.69
MSH6-203ENST00000420813 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 S100A8P05109 93 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 SMIM2Q9BVW6 85 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
MSH6-203ENST00000420813 F8WDY8 70 aa10.71□□□□□ -0.69
MSH6-203ENST00000420813 RAB5BP61020 215 aa10.71□□□□□ -0.69
MSH6-203ENST00000420813 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
MSH6-203ENST00000420813 C9orf116Q5BN46 136 aaPredicted RBP10.71□□□□□ -0.69
MSH6-203ENST00000420813 HBBP68871 147 aa10.7□□□□□ -0.7
MSH6-203ENST00000420813 MRPS36P82909 103 aaKnown RBP10.7□□□□□ -0.7
MSH6-203ENST00000420813 RPL18AQ02543 176 aaKnown RBP10.7□□□□□ -0.7
MSH6-203ENST00000420813 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
MSH6-203ENST00000420813 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
MSH6-203ENST00000420813 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
MSH6-203ENST00000420813 D6R8Y8 96 aa10.69□□□□□ -0.7
MSH6-203ENST00000420813 PPBPP02775 128 aa10.69□□□□□ -0.7
MSH6-203ENST00000420813 A0A1B0GXF2 115 aa10.68□□□□□ -0.7
MSH6-203ENST00000420813 COX19Q49B96 90 aa10.68□□□□□ -0.7
MSH6-203ENST00000420813 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
MSH6-203ENST00000420813 ORAOV1Q8WV07 137 aa10.68□□□□□ -0.7
MSH6-203ENST00000420813 OPRPNQ99935 248 aaPredicted RBP10.68□□□□□ -0.7
MSH6-203ENST00000420813 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
MSH6-203ENST00000420813 NPYP01303 97 aa10.67□□□□□ -0.7
MSH6-203ENST00000420813 MT-ND6P03923 174 aa10.67□□□□□ -0.7
MSH6-203ENST00000420813 ODF1Q14990 250 aa10.67□□□□□ -0.7
MSH6-203ENST00000420813 ATP5L2Q7Z4Y8 100 aa10.67□□□□□ -0.7
MSH6-203ENST00000420813 NDUFA1O15239 70 aa10.66□□□□□ -0.7
MSH6-203ENST00000420813 IFITM10A6NMD0 228 aa10.65□□□□□ -0.7
MSH6-203ENST00000420813 TLX1NBP0CAT3 122 aa10.65□□□□□ -0.7
MSH6-203ENST00000420813 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
MSH6-203ENST00000420813 ORMDL3Q8N138 153 aa10.64□□□□□ -0.71
MSH6-203ENST00000420813 IFI27P40305 119 aaPredicted RBP10.63□□□□□ -0.71
MSH6-203ENST00000420813 C1orf137Q5JT78 98 aa10.63□□□□□ -0.71
MSH6-203ENST00000420813 PYGO1Q9Y3Y4 419 aa10.63□□□□□ -0.71
MSH6-203ENST00000420813 TRGC2P03986 189 aa10.62□□□□□ -0.71
MSH6-203ENST00000420813 GNB1LQ9BYB4 327 aa10.62□□□□□ -0.71
MSH6-203ENST00000420813 A0A087WZ39 114 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 UNQ6190/PRO20217Q6UXQ8 127 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 C6orf48Q9UBA6 75 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 TRAPPC1Q9Y5R8 145 aa10.61□□□□□ -0.71
MSH6-203ENST00000420813 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 IGLV7-43P04211 117 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 S100A6P06703 90 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 LINC00242Q5T6M2 205 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 TMEM141Q96I45 108 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 MRPL18Q9H0U6 180 aaKnown RBP10.59□□□□□ -0.71
MSH6-203ENST00000420813 LAMTOR2Q9Y2Q5 125 aa10.59□□□□□ -0.71
MSH6-203ENST00000420813 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BKO60814 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BJP06899 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BOP23527 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BBP33778 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BDP58876 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BCP62807 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST2H2BEQ16778 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BHQ93079 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 DIRC1Q969H9 104 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BNQ99877 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 HIST1H2BMQ99879 126 aa10.58□□□□□ -0.72
MSH6-203ENST00000420813 TRBV30A0A0K0K1B3 111 aa10.57□□□□□ -0.72
MSH6-203ENST00000420813 FAM168BA1KXE4 195 aa10.57□□□□□ -0.72
MSH6-203ENST00000420813 LINC01561Q8N1V8 128 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 191.9 ms